|
Name : CD196_0390 (CD196_0390) Accession : YP_003213437.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : transposase-like protein b Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0675 EC number : - Position : 453982 - 455100 bp Length : 1119 bp Strand : + Note : - DNA sequence : GTGATAGCAGTGGAAAAAGCTTATAAGTTTAGAATGTATCCAAATAAAAAACAACAAGAGTTAATTAACAAAACTTTTGG ATGTTGTAGATTTGTATATAATAAGTATCTTGCTAAAAGAATAGAAGTTTATAAAAACGATAAAGAAACTTTTACTTATA AACAGTGTAGTTCTGATTTGACTAATTTAAAAAAAGAATTAAAATGGCTTAAGGAACCTGACAAATTTTCACTACAAAAC GCCTTAAAAGATTTAGATAATGCATATAAAAAATTCTTTAAAGAAAAAGCAGGATTTCCTAAATTTAAATCAAAGAAAAT TAATAGATTTTCATATAAAACTAACTTTACAAATGGAAACATTATGTATTGTGGTCAACATATAAAACTACCTAAACTTG GTATGGTTAAGATAAGGGATAAACAAGTACCTAAAGGGAGAATACTTAATGCCACTATATCTAAAGAACCAAGTGGTAGA TATTATGTATCATTATGCTGTACTGATGTAGATATTGAAGTATTTGAAAATACTAATAATCAGATAGGTTTAGATTTAGG AATTAAAGAATTTTGTATCTCAAGTTGTGGAGAATTTATAGAAAATCCTAAGTATCTTAAGAAGTCATTAAACAAGCTTG CTAAATTACAAAGAGAATTATCGAGAAAGACAATCGGTAGTTTAAATAGAAATAAAGCAAGATTAAAAGTTGCAAGACTT CAAGAACATATAGCTAATCAAAGAAATGATTTTCTACAAAAACTATCTACTAAATTAATAAAAGAGAATGATATTATTTG CATAGAAGATTTACAAGTAAAGAATATGATTAGGAATTGTAAACTATCTCGCTTAATTTCTGATGTGTCATGGTCAGAGT TTATTCGCCAATTAGAATACAAGGCTAATTGGCATGGTAGACAAATTGTAAAGGTAGGTAAATTCTTTGCAAGTTCACAA ATATGCAATAAATGTGGGTATAAAAACGAGGAAGTGAAAGACTTAAGTATAAGAGAATGGATTTGTCCTAGTTGTAATGA AACTCACGATAGAGATATAAATGCAAGTATAAATATATTAAAAGAAGGATTAAGACTAATAACAACTCAAAATAAATAA Protein sequence : MIAVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNDKETFTYKQCSSDLTNLKKELKWLKEPDKFSLQN ALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRDKQVPKGRILNATISKEPSGR YYVSLCCTDVDIEVFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVARL QEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIRNCKLSRLISDVSWSEFIRQLEYKANWHGRQIVKVGKFFASSQ ICNKCGYKNEEVKDLSIREWICPSCNETHDRDINASINILKEGLRLITTQNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0626 | YP_697953.1 | ISCpe2, transposase orfB | Not tested | Not named | Protein | 9e-77 | 49 |
