Gene Information

Name : CD196_0330 (CD196_0330)
Accession : YP_003213379.1
Strain : Clostridium difficile CD196
Genome accession: NC_013315
Putative virulence/resistance : Resistance
Product : ArsR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 377953 - 378318 bp
Length : 366 bp
Strand : +
Note : -

DNA sequence :
ATGAGAGAAGAGATAAATGATTGTAATTGTAATATAGTACATGAAGAAATAGTAACAGAGGCTAAATCAACTATGCCAGA
TGAAGAGATGTTATATGATTTAGCAGAATTATTTAAAGTATTTGGGGATACTACTAGAGTAAAGATATTATATGCATTAT
TTGCAAATGAAATGTGTGTATGTGATATAGCGAGTTTATTAAATATGACTCACTCTGCAATATCTCATCAACTTAGAGTA
CTAAAGCAGGCTAGATTAGTAAAGTTTAGAAGAGAAGGAAAAACAGTGTATTACTCATTAGATGATAGTCATATAAGCCA
GATATTTGATTGTGGATTAAATCATATTAGAGAAACTTATAAATGA

Protein sequence :
MREEINDCNCNIVHEEIVTEAKSTMPDEEMLYDLAELFKVFGDTTRVKILYALFANEMCVCDIASLLNMTHSAISHQLRV
LKQARLVKFRREGKTVYYSLDDSHISQIFDCGLNHIRETYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 6e-20 42
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 6e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CD196_0330 YP_003213379.1 ArsR family transcriptional regulator BAC0056 Protein 4e-14 45