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Name : dnaB (CD196_3470) Accession : YP_003216483.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 4088375 - 4089703 bp Length : 1329 bp Strand : - Note : - DNA sequence : ATGGAAGATATGACGAGAATTCCTCCTCATAGTGTAGAATCAGAACAATCAATATTGGGTTCTATACTTCTAGATAAAGA TGCTATAATAACGGTTACAGAAACTATAAAGCCTGATGATTTCTATAAAGAGGCTCACAAAATAATATATGAATGTATGA TAACTTTAAGTAATAAAGGTGAGCCTATAGACTTGATAACATTAACAGAAGAACTAAGAAAACAAGGGCATCTTAATGAT ATTGGAGGAATCAGTTATATTACAAGTCTTTCTACTATAGTACCGACGACTTCAAATGTAAAATACTATGCTGATATAGT AAAAGAAAAGTCTGTACTTAGAAAGCTTATAAAAGCTTCTAATGAAATAATAAATCTAGGATATAGTGGAGCAACTAAGA TTGAAGATGTTTTAGAACAAGCTGAAAAGAGTATATTTGATATATCACAGGAGAAAACTAGTGATGATTTTAAATCTATA AACTTAGTTTTGATGGATGCCTATGATATGATAGAAAAATTATATACTAACAAGAGTGATGTCACTGGTATAACTACTGG TTTTAAAGATTTAAACAAAAAAATAAATGGTCTTCAAAGGACTGATTTAATATTAATTGCAGCTAGACCAGCAATGGGTA AAACTGCCTTTTCTTTAAACTTGGTTCAAAATGCAGCCTTAAAAGGTGATGCCTCTGTAGCTGTATTTAGCTTAGAGATG TCTAAGGAACAATTAGTACAACGTATGTTATCTTCACAATCTAGTGTAGAATTAAAAAAAATAAAGACTGGAACACTTAA TGATAATGATTGGCCTAGAATTATAGATGCTATGGCAGTATTATCAGATGCCAAAATACACATAGATGATACTCCTGGTA TAAAAATATCAGAACTAAGGTCAAAGTGTAGAAAGTTAAAAATAGAAAAAGGACTAGATTTAGTGCTTATTGATTATCTT CAACTTATGGAAGGTGAAGGTAATAATGAAAGCAGACAACAAGAGATATCTAAGATATCAAGGTCACTAAAAATATTAGC AAAAGAATTAAACTGTCCTGTAGTTGCACTATCTCAGTTATCACGTGCACCAGAACAAAGAGCAGACCATAGACCTATGT TATCTGATTTAAGAGAGTCTGGAGCAATAGAACAGGATGCAGATATAGTTATGTTCTTATACAGGGACGAATATTATCAT GCTGATTCTGAGAGTAAAAATATAGGAGAAGTAATAATAGCAAAAAATAGACACGGTGAAACTGGTTCTGTGGAACTTGT TTGGCTTGGTGAAGTTCAAAGATTTGGGGATAAGTTGAGAGACCTATAA Protein sequence : MEDMTRIPPHSVESEQSILGSILLDKDAIITVTETIKPDDFYKEAHKIIYECMITLSNKGEPIDLITLTEELRKQGHLND IGGISYITSLSTIVPTTSNVKYYADIVKEKSVLRKLIKASNEIINLGYSGATKIEDVLEQAEKSIFDISQEKTSDDFKSI NLVLMDAYDMIEKLYTNKSDVTGITTGFKDLNKKINGLQRTDLILIAARPAMGKTAFSLNLVQNAALKGDASVAVFSLEM SKEQLVQRMLSSQSSVELKKIKTGTLNDNDWPRIIDAMAVLSDAKIHIDDTPGIKISELRSKCRKLKIEKGLDLVLIDYL QLMEGEGNNESRQQEISKISRSLKILAKELNCPVVALSQLSRAPEQRADHRPMLSDLRESGAIEQDADIVMFLYRDEYYH ADSESKNIGEVIIAKNRHGETGSVELVWLGEVQRFGDKLRDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-74 | 43 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-85 | 42 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-73 | 42 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-73 | 42 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 7e-77 | 42 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 3e-77 | 42 |
