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Name : CD196_3421 (CD196_3421) Accession : YP_003216435.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : conjugative transposon protein Function : - COG functional category : - COG ID : - EC number : - Position : 4036114 - 4037007 bp Length : 894 bp Strand : + Note : - DNA sequence : ATGTTTAAAAAGAAAGAAAAACCAGTAAAAGAAACGAAAGTCCGCACTATGAAAGTAGGCACACATAAGAAATCTGTGAT TGCTCTGTGGGTGGTGCTTATCGCCAGCGTATCATTTGGCGTGTATAAGAACTTTACCGCCATTGATATGCACACGGTAC ATGAAACGGAAACCATTCAGTTAAGACTAAATGACACCAACGGAGTTGAAAATTTTGTGAAGAACTTCTGTAAGTCCTAC TACACATGGGACAACAGCAAGGAAGCTATCGAAGCAAGGACGCAGGCAATCAGCAACTATCTGACAAAGGAGTTGCAGGA CTTGAACCTTGATACCATTAGGACGGATATACCGACAAGCTCCACTGTTACAAATGTACTGATTTGGGATATAAAACAGT CTGGAACGAACGATTTTATCGCTACCTACGAAGTAGATCAGCAGATAAAAGAGGGAGAACAGACAAGCAATGTCAAAGCA ACCTATACCGTCAAAGTCCATGTGGATAAAGACGGCGATATGGTTATCGTACAGAACCCAACCATTGCACCAGCGATTGA AAAATCAGACTATGAGCCAAAGGCACAAGAAGCCGACGCAAGCGTGGACGCAGATACCGTCAATGACGCTACCGCATTTT TGGAAACTTTCTTTAAGCTGTATCCGACAGCAACAGAAAAAGAACTTGCCTACTATGTGGCTGGCAATGTGCTTGAACCT ATCGGCAGGGACTACCTCTATTCCGAATTAGTCAATCCTATGTTTACGGATGACAGGGATAATGTGAAAGTCAGGGTTGC GGTGAAATTCATTGATAATCAGACAAAGGCAATGCAGGTATCACAGTTTGAGCTTGTGTTACATAAGGATAGCAACTGGA AAATTATTATGTAA Protein sequence : MFKKKEKPVKETKVRTMKVGTHKKSVIALWVVLIASVSFGVYKNFTAIDMHTVHETETIQLRLNDTNGVENFVKNFCKSY YTWDNSKEAIEARTQAISNYLTKELQDLNLDTIRTDIPTSSTVTNVLIWDIKQSGTNDFIATYEVDQQIKEGEQTSNVKA TYTVKVHVDKDGDMVIVQNPTIAPAIEKSDYEPKAQEADASVDADTVNDATAFLETFFKLYPTATEKELAYYVAGNVLEP IGRDYLYSELVNPMFTDDRDNVKVRVAVKFIDNQTKAMQVSQFELVLHKDSNWKIIM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1696 | YP_003446798.1 | hypothetical protein | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-112 | 87 |
| SSU05_0923 | YP_001198289.1 | Tn916 hypothetical protein | Not tested | 89K | Protein | 2e-74 | 54 |
| SSU98_0929 | YP_001200487.1 | Tn916 hypothetical protein | Not tested | 89K | Protein | 2e-74 | 54 |
