|
Name : CD196_3413 (CD196_3413) Accession : YP_003216427.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : conjugative transposon replication initiation factor Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2946 EC number : - Position : 4026294 - 4027415 bp Length : 1122 bp Strand : + Note : - DNA sequence : ATGGCTGGTATCAGCCGTGAACATCTAAGCCGTATCGAAGCTGGGAAGGTAGCACTGACCGAGGATATGAAGCACAAACT ACTGGAAGCGGTGGAAAAATTCAATCCCGACGCTCCCATGTTCCTGCTCTTTGATTATGTGCGTATCCGATTTCCCACGC TGGATATACAGCACGTTATCAAGGACATTCTAAAGCTGAATATAGATTATATGCTTCACGAAGATTTCGGGCATTACAAG TACACCGAGCATTACTATATCGGGGACGTGTTCGTTTACACTTCACAAGACAAGGAAAAAGGTGTCCTGCTGGAACTGAA AGGAAAAGGCTGTCGTCAGTTTGAAAGCTATCTGCTGGCACAGGAAAGAAGCTGGTATGACTTCCTCATGGACGCATTAG TTGATGGCGGTGTGATGAAGCGTATCGACCTAGCTATCAACGACAGAACGGGCTTACTGGATATTCCAGAACTGATAGAG AAATGCAAGAACGAGGAATGTATTTCTAAATTCCGTAGCTTCAAGAACTATGGTTCTGGGGAGCTGGTAAAGCACAACGA AGCCAACAAGGACGGCATGGGACATACGCTTTACATTGGTTCATTTACCAGTGAAGTGTACTTCTGTGTCTATGAAAAGA ATTATGAACAATCCTCAAAATTAGGGATACCGATTGAGGAAGTCCCCATTAAAAACCGATTTGAGATACGTTTGAAAAAT GAGCACGCCTACTATGCCATTAGAGAGCTGCTGACCCACTACGACGCAGAGCTGACGGCATTTTCTATTATCAACCAGTA TATCCGCTTTGCCGATAAGGAAGCCAACAAGCGAAAAAGCGACTGGAAAACCAACGCCCGCTGGTCTTGGTTCATTGGCG AGGGACGACCGCCCGTGAAGCTGACGACAAAGCCAGAGCCTTACACTCTGCAAAGGACGCTGAACTGGTTACAAAGACAG GTTGCACCGACCTTGAAAATGCTGAAACAGATAGACGCTGGCAATCAGATGGACTATCTCAAGACCATTGAACAGCAGGC AAAGCTGACAGATAAGCACAAGCAGATAATCAGACAGCAGACGGCTTCGGTGGACGAACTGATAGAAAAAGAAAAGGAGT GA Protein sequence : MAGISREHLSRIEAGKVALTEDMKHKLLEAVEKFNPDAPMFLLFDYVRIRFPTLDIQHVIKDILKLNIDYMLHEDFGHYK YTEHYYIGDVFVYTSQDKEKGVLLELKGKGCRQFESYLLAQERSWYDFLMDALVDGGVMKRIDLAINDRTGLLDIPELIE KCKNEECISKFRSFKNYGSGELVKHNEANKDGMGHTLYIGSFTSEVYFCVYEKNYEQSSKLGIPIEEVPIKNRFEIRLKN EHAYYAIRELLTHYDAELTAFSIINQYIRFADKEANKRKSDWKTNARWSWFIGEGRPPVKLTTKPEPYTLQRTLNWLQRQ VAPTLKMLKQIDAGNQMDYLKTIEQQAKLTDKHKQIIRQQTASVDELIEKEKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0930 | YP_001198296.1 | Tn916, transcriptional regulator | Not tested | 89K | Protein | 7e-112 | 63 |
| SSU98_0936 | YP_001200494.1 | Tn916, transcriptional regulator | Not tested | 89K | Protein | 7e-112 | 63 |
