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Name : CD196_3412 (CD196_3412) Accession : YP_003216426.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : conjugative transposon FtsK/SpoIIIE-like protein Function : - COG functional category : D : Cell cycle control, cell division, chromosome partitioning COG ID : COG1674 EC number : - Position : 4024620 - 4026014 bp Length : 1395 bp Strand : + Note : - DNA sequence : ATGCGAATGATTTTGAATAAAGGACACCGTATCAGAGCCAGAGACAAGAACCTTGTCTACCACTTTTCCATAGGGACGCT TCTGTTTGTATTTGTGGCGGTTCTCCTGCTACTGAATATCAAACAGCTCATGCGTACCGACTGGGAACATTTCAGCTTAT TGGACAATGGCTTGACGCTTTCCCCCTACAACTTCATAACCATATTGATAGCGACTGGTATTTGTGCATTGGTCGCTTTT CTGTATTACCGCTTCTGTTATGACAGTTTCAAAAAGCTCCTGCACCGTCAAAAGCTGGCACGAATGATACTGGAAAACAA GTGGTATGAAGCAGATACCGTACAAGACAGCGGTTTTTTTACTGACCTGCAAAGCAGATCAAGGGAAAAAATCGTCTGGT TTCCAAAGATTTATTATCAAATGGAAAACGGATTGCTTCATATTCACTGTGAAATCACATTAGGAAAATATCAAGACCAG CTTTTGCGATTAGAGGATAAGCTGGAAAGCGGTTTGTACTGTGAGCTGACCGACAAGACCTTGCATGACGGCTATATTGA GTACACGCTTTTATATGACATGATAGCGAACCGTATTTCCATTGACGAAGTGAAAGCAGAAAACGGCTGTCTTAGGCTGA TGAAAAATCTTGTCTGGGAATATGACGTACTCCCTCACGCTCTGATAGCTGGTGGGACTGGTGGCGGTAAGACCTACTTT CTGCTGACGCTTATTGAAGCTCTGCTACATACGAATGCTGTCCTTTACATCTTAGACCCAAAGAACGCTGACCTTGCAGA CTTAGGTACAGTTATGGGAAATGTGTATCATACCAAAGAAGATATGATTGATTGTGTCAATGCCTTTTATGAGGGCATGG TACAAAGAAGCGAAGAAATGAAGCAACACCCAGACTATAAAACGGGCGAAAACTACGCCTATCTTGGTTTACCGCCCTGC TTTCTTATCTTTGATGAATATGTGGCGTTTTTTGAAATGCTGGGGACAAAGGAAAGCGTAAGTTTACTTAGCCAGTTAAA GAAAATCGTTATGTTGGGACGACAAGCTGGATATTTCCTTATTGTTGCCTGCCAGCGTCCAGACGCAAAATATTTCTCGG ACGGTATCAGAGATAATTTCAATTTCCGTGTTGGATTGGGGCGTATCAGCGAATTGGGTTACGGTATGCTCTTTGGTTCT GATGTGAAAAAACAGTTTTTCCAGAAGCGTATCAAGGGGCGTGGCTATTGTGATGTGGGAACAAGTGTCATAAGTGAGTT TTACACGCCTTTAGTCCCGAAAGGACATGATTTTTTGCAGACCATAGGCTCTCTTGCATTCGTAAGGCAGGACGGGACGG CGACGTGCGAAGCGAAAGGCGACGGCACGGACTAG Protein sequence : MRMILNKGHRIRARDKNLVYHFSIGTLLFVFVAVLLLLNIKQLMRTDWEHFSLLDNGLTLSPYNFITILIATGICALVAF LYYRFCYDSFKKLLHRQKLARMILENKWYEADTVQDSGFFTDLQSRSREKIVWFPKIYYQMENGLLHIHCEITLGKYQDQ LLRLEDKLESGLYCELTDKTLHDGYIEYTLLYDMIANRISIDEVKAENGCLRLMKNLVWEYDVLPHALIAGGTGGGKTYF LLTLIEALLHTNAVLYILDPKNADLADLGTVMGNVYHTKEDMIDCVNAFYEGMVQRSEEMKQHPDYKTGENYAYLGLPPC FLIFDEYVAFFEMLGTKESVSLLSQLKKIVMLGRQAGYFLIVACQRPDAKYFSDGIRDNFNFRVGLGRISELGYGMLFGS DVKKQFFQKRIKGRGYCDVGTSVISEFYTPLVPKGHDFLQTIGSLAFVRQDGTATCEAKGDGTD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0931 | YP_001198297.1 | hypothetical protein | Not tested | 89K | Protein | 4e-150 | 67 |
| SSU98_0937 | YP_001200495.1 | hypothetical protein | Not tested | 89K | Protein | 4e-150 | 67 |
