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Name : CD196_3244 (CD196_3244) Accession : YP_003216258.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : transposase mutator type Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 3847303 - 3848568 bp Length : 1266 bp Strand : - Note : - DNA sequence : GTGATAATTAAAATATTAAATATCACTATATATAAGGAAGGTGCACACTTTTTATGTTACAAAAACGAAATATTAAAAAA ACTTATTGAAGAATATGATGTTAAAACAACTACAGATATTCAAGATATGCTAAAAGATTTATTTGCAAGTACAATTCATC AAATGTTAGAAGCGGAGCTTGACGACCATTTAGGTTATGATAGATATGACAATAAGAATAAAAATACTAAAAACTCTAGA AATAGATATAGAAATAAAAATGTTAAATCAGATTTTGGAGAAATAACTTTAAATATTCCAAGAGATCGAAATGGAGATTT TGAACCAAAGGTAATTAGAAATTATGAAAATGATATATCAGGAATAGAGAACCAAGTGATTGGAATGTACTCAAAAGGTA TGTCTACTCGAGATATATCAAGCCACCTTAAGAGTATTTACGGAATTGATATATCTCATTCTCTAATAGCTAAAATTACT GATAGAGTTCTACCTTTAGCTCATGAATGGCAAAGCAGAGCTCTTGATATGGTTTATCCAATTGTATTTATGGGTGCTAT ACATTATAAAGTTAGAAGTGAAGGTAGAATAATAAACAAAGCTGCATATATAGCCATAGGTGTTAACTTAGAAGGTATAA CGGAGGTCTTAGGAATATGGATTGGAGAAAATGAAAGTTCAAAGTATTGGCTAAAGGTGCTTACAGATGTCAAAAACAGA GGAGTTAAGGATATATTAATAACTTCTGTAGATGGATTAGTTGGATTTTCTGATGCAATTAAAGCAGTATTTCCTGATAC TGAAATACAAAGATGTGTTGTACATCAAATTAGAAATACTTTAAATTATGTATCATATAAAAATAGAAAAGAATTTGCAA AAGATTTAAAGAAAGTATATGCTGCAATTACAGAGGAAGTAGCATTAAGTGAGCTATCGCTCTTAGAGGAAAAATGGGGT AATCAATATGCGATAGCATTAAGAAGTTGGCGAAGTAATTGGAATGAGCTAGCAACATACTTTAAATATCCTCAAGAGAT AAGAACATTGATATATACTACAAATTCAATGGAAAGTTACAATAGATTATTAAGAAAAGTTACTAAATCGAAGTCTATTT TTCCTTCAGATGATTCTTTGCACAAATCATTATACTTAGCAACTATGGATATTTCTGAAAGATGGACTCAAAAGATTAGA AATTGGACTCAAATCTTAGCTCATTTAAGTATTTATTTTGAAGAAAGAATTTTAACTCTAAATTAA Protein sequence : MIIKILNITIYKEGAHFLCYKNEILKKLIEEYDVKTTTDIQDMLKDLFASTIHQMLEAELDDHLGYDRYDNKNKNTKNSR NRYRNKNVKSDFGEITLNIPRDRNGDFEPKVIRNYENDISGIENQVIGMYSKGMSTRDISSHLKSIYGIDISHSLIAKIT DRVLPLAHEWQSRALDMVYPIVFMGAIHYKVRSEGRIINKAAYIAIGVNLEGITEVLGIWIGENESSKYWLKVLTDVKNR GVKDILITSVDGLVGFSDAIKAVFPDTEIQRCVVHQIRNTLNYVSYKNRKEFAKDLKKVYAAITEEVALSELSLLEEKWG NQYAIALRSWRSNWNELATYFKYPQEIRTLIYTTNSMESYNRLLRKVTKSKSIFPSDDSLHKSLYLATMDISERWTQKIR NWTQILAHLSIYFEERILTLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0630 | YP_697957.1 | ISCpe3, transposase | Not tested | Not named | Protein | 3e-99 | 52 |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 2e-83 | 46 |
