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Name : CD196_2857 (CD196_2857) Accession : YP_003215873.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : PTS system transporter subunit IIC Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3715 EC number : - Position : 3356079 - 3356858 bp Length : 780 bp Strand : - Note : - DNA sequence : ATGGAGCCACAATTATGGCAATTATTATTAATCGTACTATATGGATTTTTTATAAACTATGAAAAAAATTCAACAATGTT TGGAACATATCAACCAGTAACAGCAGGTTTTATTACTGGTCTTATCTTAGGAGATATAAATACAGGGTTATATATTGGAG GTACATTACAGCTATTATCATTAGGTATTAGTAACTTTGGTGGAGCATCAATACCTGATTATCAAACAGCAAGTATAGTA GCCACATTTATAACTATTACGACTAAGCAAGAAGCATCTGTAGGAATCTCTATAGGTATTCCAGTTGCTTTATTGATGGT ACAATTAGATGTTCTTAGAAATACTATTGGTATATGGCTAGTTCATAAAGCAGAAGATGGAGCTAAAAAAGGAAATTATA AAAATATAACCTATATGCAAATGTTAGGAGTACTATTAACAGCAGCTACAACAGGTATTCCAGTTGCTCTATCTGTAATA TTTGGACCTTCTTTAATTAATACCATTTTGAAATATACACCTGAATGGTTAACAGGTGGTTTAACAGTAGCTGGAGGACT ACTTCCAGCAGTAGGGATAGGATTATTACTTAGATATCTTCCTGCTAAGGAGTATTTTAGTTACTTAGTAATTGGTTTTG TTTTAGCAGTATATATGAAAGTACCATTATTAGGTGTAGCTTTAATTGGTGGAGCAATTGCACTTATAATTTACAAAAAG AATTTGGAAAATCAAGAACAACAATATACTGTAGTAGGAGGTATGGACGAAGATGAGTGA Protein sequence : MEPQLWQLLLIVLYGFFINYEKNSTMFGTYQPVTAGFITGLILGDINTGLYIGGTLQLLSLGISNFGGASIPDYQTASIV ATFITITTKQEASVGISIGIPVALLMVQLDVLRNTIGIWLVHKAEDGAKKGNYKNITYMQMLGVLLTAATTGIPVALSVI FGPSLINTILKYTPEWLTGGLTVAGGLLPAVGIGLLLRYLPAKEYFSYLVIGFVLAVYMKVPLLGVALIGGAIALIIYKK NLENQEQQYTVVGGMDEDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0552 | NP_814322.1 | PTS system transporter subunit IIC | Not tested | Not named | Protein | 8e-84 | 84 |
| ef0078 | AAM75282.1 | EF0078 | Not tested | Not named | Protein | 6e-84 | 84 |
