|
Name : xylA (CD196_2851) Accession : YP_003215867.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 3349843 - 3351207 bp Length : 1365 bp Strand : - Note : - DNA sequence : ATGTGTAAAATATTAGGAGGACATGAAATGAGTGAAATATTTAAAGGAATAGGACAGATAAAATTTGAAGGAGTAAAATC TGACAATGAATTAGCATTTAGATACTACAATCCTGAACAAGTGGTAGGTAATAAGACTATGAAAGAACACTTAAGATTTG CAATGAGCTATTGGCATACTTTATGTGGAGAGGGTAATGACCCATTTGGAGTAGGCACAGTAGAGAGACCTTGGAATAAT GTAACAGACCCAATTGAGATAGCAAAGATTAAAGTTGATGCAGGATTTGAATTTATGTCTAAGATGGGAATTGAGTATTT CTGTTTTCATGACAGAGATATAGCTCCAGAAGGAAGAGATTTAGAAGAGACAAATAAGATATTAGATGAAATAGTTGAGT ATATAAAAGTTAATATGGAAAAGACAGGTATAAAGTTATTATGGGGAACTGCCAATATGTTTGGAAATCCAAGATTTGTT CATGGTGCATCTACAACATGTAATGCAGATGTATATGCATATGCAGCAGCTCAGGTTAAAAAAGCTATGGAAATAACTAA GTACTTAGGAGGAGAAAATTTTGTATTCTGGGGTGGAAGAGAAGGTTATGAAACTTTACTTAACACTAATACAGAACTTG AAATGGATAACTTTGCAAGATTCTTACAAATGGCTGTAGATTATGCTAAGGAAATAGGATTCACTGGCCAATTCTTAATA GAGCCTAAGCCAAAAGAGCCTACTAAACATCAATACGATTTTGATACTGCTACTGTTTTAGGATTTTTAAGAAAGTATAA TCTGGATAAATACTTCAAAATGAATATAGAAGCAAACCATGCAACACTTGCAGGACATACTTTCCAACATGAATTAAATA TAGCAAGAATAAACAATGTTTTAGGTAGTATAGATGCAAATCAAGGAGACCTATTATTAGGTTGGGATACAGACCAATTT CCAACAAATATATATGATGCAACACTTGCTATGTATGAAGTGTTAAAGCAAGGTGGAATAGCACCAGGAGGATTTAACTT TGACTCTAAAGTAAGAAGAGCATCTTTTGAGGTAGAAGACTTATTCCTAGCTTATATTGCAGGAATGGATACATTTGCAA AGGGATTATTAATAGCTCATAAATTATTAGAAGATGAGGTATTTGAAAACTTTACTAAAGAAAGATATGCAAGTTTTAGT GAAGGTATAGGTAAGGATATAGTAGAAGGTAAGGTTGGATTTAAAGAGTTAGAATCTTATGCACTGCAAATGCCAGTTAT AAAGAATAAGTCTGGAAGACAAGAAATGCTAGAAGCTATACTTAACAGATATATATATGAAGTAGATACAATTTCTAATA AGTAA Protein sequence : MCKILGGHEMSEIFKGIGQIKFEGVKSDNELAFRYYNPEQVVGNKTMKEHLRFAMSYWHTLCGEGNDPFGVGTVERPWNN VTDPIEIAKIKVDAGFEFMSKMGIEYFCFHDRDIAPEGRDLEETNKILDEIVEYIKVNMEKTGIKLLWGTANMFGNPRFV HGASTTCNADVYAYAAAQVKKAMEITKYLGGENFVFWGGREGYETLLNTNTELEMDNFARFLQMAVDYAKEIGFTGQFLI EPKPKEPTKHQYDFDTATVLGFLRKYNLDKYFKMNIEANHATLAGHTFQHELNIARINNVLGSIDANQGDLLLGWDTDQF PTNIYDATLAMYEVLKQGGIAPGGFNFDSKVRRASFEVEDLFLAYIAGMDTFAKGLLIAHKLLEDEVFENFTKERYASFS EGIGKDIVEGKVGFKELESYALQMPVIKNKSGRQEMLEAILNRYIYEVDTISNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 3e-119 | 61 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 3e-119 | 61 |
