|
Name : CD196_2786 (CD196_2786) Accession : YP_003215804.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : transposase-like protein b Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0675 EC number : - Position : 3272058 - 3273176 bp Length : 1119 bp Strand : - Note : - DNA sequence : GTGGTAGTAGTGGAAAAAGCTTATAAGTTTAGAATGTATCCAAATAAAAAGCAACAAGAGTTAATTAACAAAACTTTTGG ATGTTGTAGATTTGTATATAATAAGTATCTTGCTAAAAGAATAGATGTTTATAAAAACAATAAAGAAACTTTTACTTATA AACAGTGTAGTTCTGATTTGAACAATTTAAAAAAAGAATTAAAATGGCTTAAGGAACCTGACAAATTTTCACTACAAAAC GCCTTAAAAGATTTAGATAATGCATATAAAAAATTCTTTAAAGAAAAAGTAGGATTTCCTAAATTTAAATCAAAGAAAAT TAATAGATTTTCATATAAAACTAACTTTACAAATGGAAACATTATGTATTGTGGTCAACATATAAAACTACCTAAACTTG GTATGGTTAAGATAAGGGATAAACAAGTACCTAAAGGGAGAATACTTAATGCTACTATATCTAAAGAACCAAGTGGTAGA TATTATGTATCATTATGCTGTACTGATGTAGATATTGAAGCATTTGAAAATACTAATAATCATATAGGTTTAGATTTAGG AATTAAAGAATTTTGTATCTCAAGTTGTGGAGAATTTATAGAAAATCCTAAGTATCTTAAGAAGTCATTAAACAAACTTG CTAAATTACAAAGAGAATTATCGAGAAAGACAATCGGTAGTTTAAATAGAAATAAAGCAAGATTAAAAGTTGCAAGACTT CAAGAACATATAGCTAATCAAAGAAATGATTTTCTGCAAAAACTATCTACTAAATTAATAAAAGAGAACGATATTATTTG CATAGAAGATTTACAAGTAAAGAATATGATTAAAAATCGTAGACTATCTCGCTTAATTTCTGATGTATCATGGTCAGAAT TTGTTCGTCAATTAGAATACAAGGCTAATTGGTATGGTAGAAAAATTGTAAAGGTAGGTAAATTCTTTGCAAGTTCACAA ATATGCAATAAATGTGGGTATAAAAACGAGGAAGTGAAGGACTTAAATATAAGAGAATGGATTTGTCCTAGTTGTAATGA AACTCACAATAGAGATATAAATGCAAGTATAAATATATTAAAAGAAGGATTAAGACTAATAACAATTCAAAATAAATAA Protein sequence : MVVVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKNNKETFTYKQCSSDLNNLKKELKWLKEPDKFSLQN ALKDLDNAYKKFFKEKVGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRDKQVPKGRILNATISKEPSGR YYVSLCCTDVDIEAFENTNNHIGLDLGIKEFCISSCGEFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVARL QEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIKNRRLSRLISDVSWSEFVRQLEYKANWYGRKIVKVGKFFASSQ ICNKCGYKNEEVKDLNIREWICPSCNETHNRDINASINILKEGLRLITIQNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0626 | YP_697953.1 | ISCpe2, transposase orfB | Not tested | Not named | Protein | 2e-72 | 49 |
