Gene Information

Name : CD196_2738 (CD196_2738)
Accession : YP_003215756.1
Strain : Clostridium difficile CD196
Genome accession: NC_013315
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 3217021 - 3218010 bp
Length : 990 bp
Strand : -
Note : -

DNA sequence :
ATGAGTTACTTAAAAATAAATAATGTGTTTAAAAGTTATGACCAAAAAAGGGTTTTAAATAATATTAGTTTGGATATTGA
AGAAGGGGAATTTCTATGTTTACTCGGACCTAGTGGATGTGGTAAAACTACATTACTTAGAATAATAGCAGGTCTTGAAG
ATGTAAATAGTGGAACTATAATTCTCCAGGATAAAGATATTACAAATTTAGAGCCATCAAAGAGAGGTTTTGGTATAGTA
TTTCAATCATATGCATTATTTCCGAATATGACTGCTTATAACAATATAGCTTTTCCACTAAAAGAGAGAAAAGTTTCAAA
AGAAAAAATAGATAATAAAGTTAAGGAAGTACTTGAAACAGTTGGATTGACTAATGAAGCTCATAAATATCCTAAAGCAT
TATCAGGTGGGCAACAACAGAGGATTGCAATAGCAAGAGCATTAGCTCTTGAACCAAAGTTTTTACTTTTAGATGAACCA
ATGTCCGCATTAGATGCAAAGGTTAGACACAAGCTTAGAATGGACATTAAAAGATTACAAAAAGAACTTAATATAACGAC
AATAATGGTAACACATGACCAAGAAGAAGCTATAACTATGGCAGATAAAATAGCTATTCTAAATGGAGGAGATATAATGC
AAATAGGGACTCCAGAAGAAATATACCAAAATCCTCAAAACCTATTTACAGCTCAATTTATAGGAGATACAAACTGTTTT
GATAATGGAGATTCTATATTAACTGTAAGACCAGAATATGTTCAAATAGAGAAATCGACAAAAGAAAACTACCAAGGTAT
AATATCAAATATAGAGTTTAGAGGGAATTTATTGAGAGTTGAAATAAAAGATAAATTAAATGAAAATTTCATAATAAGTG
ATGTTTCTATAAAAGAGTGGGTTAATTTAAATTTAGTAGAAGGTGACCTTGTAAAAATAAGTATAGACGAAAAATACTAT
TTAAAGTATCCAAAAGTTAAAGGAGCATAA

Protein sequence :
MSYLKINNVFKSYDQKRVLNNISLDIEEGEFLCLLGPSGCGKTTLLRIIAGLEDVNSGTIILQDKDITNLEPSKRGFGIV
FQSYALFPNMTAYNNIAFPLKERKVSKEKIDNKVKEVLETVGLTNEAHKYPKALSGGQQQRIAIARALALEPKFLLLDEP
MSALDAKVRHKLRMDIKRLQKELNITTIMVTHDQEEAITMADKIAILNGGDIMQIGTPEEIYQNPQNLFTAQFIGDTNCF
DNGDSILTVRPEYVQIEKSTKENYQGIISNIEFRGNLLRVEIKDKLNENFIISDVSIKEWVNLNLVEGDLVKISIDEKYY
LKYPKVKGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-30 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-30 41