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Name : queA (CD196_2646) Accession : YP_003215664.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : S-adenosylmethionine:tRNA ribosyltransferase-isomerase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0809 EC number : - Position : 3103495 - 3104520 bp Length : 1026 bp Strand : - Note : Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step DNA sequence : TTGAAAACAAGTGATTTTAAATTTGACTTACCACAGGAACTTATAGCTCAAGTTCCTATAGAAGATAGAGCTAGCTCAAG ATTGATGGTATTAGATAAAGAGACAGGTAATATTGAACATAAAGTATTTAGAGATATAATAGAATATTTAAATCCAGGAG ATTGTTTAGTATTAAATAATACTAGAGTTATACCAGCTAGATTAATAGGAGAGAAGCTTGAAACTGGAGGTAAAATAGAG TTTTTATTATTAAAAAGAACAGAGGAAGATACTTGGCAGGCTTTAGTAAAACCAGGAAAAAGAGCAAAAGTAGGGACTAA ATTTTCTTTTGGAAATGGAAAGCTAATTGGAGAAGTTGTAGATTTATCAGATGAAGGTTCAAGAATTATAAAATTCCTTT ATGATGGAATTTTTGAAGAAATATTGGATGAACTTGGAAATATGCCACTACCTCCATATATCACTGCTAGACTAGATGAA AAAGAAAGATACCAGACTGTTTATTCAAAGCATAATGGTTCAGCAGCAGCACCTACAGCAGGATTACATTTTACAGAAGA ATTGTTAAATAAAATAAAAGAAAAAGGTGTAGATATAGCTTTTGTAACTCTACACGTTGGTTTAGGCACTTTTAGACCAG TAAAAGTAGAAGATGTTTTAAATCACAAGATGCATTCAGAATATTATATGGTTAGCCAAGAAGCAGCTGACAAAATAAAT AGAGCGAAGGAAAATGGAAACAATGTAATATGTGTTGGTACTACTAGTTGTAGAACTATAGAATCAGCTTGTAATGAGGA TGGAAAGATGAAAGAAACTAGTGGATGGACAGAAATATTTATATATCCAGGTTATAAATTTAAAGTTTTAGATAAACTTA TTACTAATTTTCATTTACCAGAATCTACACTAATAATGTTAGTAAGTGCTATTTGTGGAAAGGATAATGTTTTAAATGCA TATAATGAGGCAGTAAAAGAAAGATATAGATTCTTCAGTTTTGGAGATGCTATGATTATAAAGTAG Protein sequence : MKTSDFKFDLPQELIAQVPIEDRASSRLMVLDKETGNIEHKVFRDIIEYLNPGDCLVLNNTRVIPARLIGEKLETGGKIE FLLLKRTEEDTWQALVKPGKRAKVGTKFSFGNGKLIGEVVDLSDEGSRIIKFLYDGIFEEILDELGNMPLPPYITARLDE KERYQTVYSKHNGSAAAPTAGLHFTEELLNKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKMHSEYYMVSQEAADKIN RAKENGNNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPGYKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNA YNEAVKERYRFFSFGDAMIIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| queA | AAF71483.1 | QueA | Not tested | Hrp PAI | Protein | 2e-72 | 49 |
| queA | AAT96122.1 | QueA | Not tested | T-PAI | Protein | 2e-72 | 49 |
| queA | AAT96182.1 | QueA | Not tested | T-PAI | Protein | 4e-68 | 48 |
| queA | AAF71490.1 | QueA | Not tested | Hrp PAI | Protein | 3e-69 | 47 |
| queA | AAT96106.1 | QueA | Not tested | T-PAI | Protein | 1e-68 | 47 |
| queA | AAT96042.1 | QueA | Not tested | T-PAI | Protein | 1e-68 | 47 |
| queA | AAT96070.1 | QueA | Not tested | T-PAI | Protein | 8e-69 | 47 |
