|
Name : CD196_2624 (CD196_2624) Accession : YP_003215642.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Virulence Product : glycosyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG2148 EC number : - Position : 3064305 - 3065003 bp Length : 699 bp Strand : - Note : - DNA sequence : ATGGAGGTAACTATGTCTGGATATACTAATGATGAGTGTGAAATACCTAAAATTAAAAGCTATCCAGGGGCAGATAAAGA AATTGCAAGTGAGATTGACTATAGCATAGTAAAAGGAACGGTTTTATTCGACTTGTACCAAAGAATTATGGATTTAGTTT TATCTATAATAGGACTTGTGATAGGTTTACCTTTAATAGCAATATTTGGAATTCTTATTAAAATAGAGGACAAAGGACCA ATAACTTATAAGCAAGAAAGACTAGGAAAATGCGGGAGAAGATTCTATATATATAAATTAAGATCTATGAGAACAGACGC AGAAAAATTTGGCGCACAATGGGCTGAAAAAGATGATCCTAGAATAACTAAGGTTGGAAAGTTTATTAGGAAAACTAGAA TTGATGAGATTCCACAGCTGTTTAATATATTAAAGGGGGATATGGGCTTAATAGGCCCTAGACCAGAGAGACCGAACTTT ACTGTTCAATTCAATGAGGAAATACCTGGATTTATCAACAGGCTCGCTATAAAACCTGGGCTTACAGGTTGGGCACAAGT AAATGGTGGATACGAAATCACTCCTGAAGAAAAACTTAAAGAAGATATTTACTATATAAAAAATAGGAGTATATTACTTG ACTTTAAGATACTCTTTAAAACTGTTAAAGTAGTATTGACAGGAGACGGAGCTAGATAA Protein sequence : MEVTMSGYTNDECEIPKIKSYPGADKEIASEIDYSIVKGTVLFDLYQRIMDLVLSIIGLVIGLPLIAIFGILIKIEDKGP ITYKQERLGKCGRRFYIYKLRSMRTDAEKFGAQWAEKDDPRITKVGKFIRKTRIDEIPQLFNILKGDMGLIGPRPERPNF TVQFNEEIPGFINRLAIKPGLTGWAQVNGGYEITPEEKLKEDIYYIKNRSILLDFKILFKTVKVVLTGDGAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1N | AAL26667.1 | type 8 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-25 | 47 |
| SSP0070 | YP_300160.1 | capsular polysaccharide synthesis protein | Not tested | SCC15305cap | Protein | 2e-25 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CD196_2624 | YP_003215642.1 | glycosyltransferase | VFG1309 | Protein | 1e-24 | 42 |
