Gene Information

Name : gtaB (CD196_2556)
Accession : YP_003215574.1
Strain : Clostridium difficile CD196
Genome accession: NC_013315
Putative virulence/resistance : Virulence
Product : UTP--glucose-1-phosphate uridylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : -
Position : 2974990 - 2975934 bp
Length : 945 bp
Strand : -
Note : -

DNA sequence : 
TTGAAGAAAAAGTATAAATATGGTATATTAATTTGGTACAATAGAAAATTTACGAAGAAGGGTGAAAAAATGCAGATGAC
AGTTAAAAAAGCAATAATACCAGCAGCAGGGCTAGGAACCAGATTTTTACCAGCAACAAAATCACAGCCCAAAGAAATGC
TTCCTATAGTAGATAAACCAACTTTACAGTATATAATAGAAGAAGCTATAGAATCGGGAATTGAAGAAATTCTTATAATA
ACAGGTAGAAATAAAAAATCTATAGAAGATCATTTTGATAAATCAGTTGAATTAGAGTTAGAACTAGAGCAAAAAGGTAA
GACAGAGATGTTAGAAATGGTAAGAGACATATCAAATATGGTAAATATTCATTATATAAGACAAAAAGAGCCAAAAGGTC
TTGGACATGCAATTTACTGTGCAAAAAGTTTTATAGGTGATGAACCTTTTGCCGTATTATTAGGTGATGATATAGTAGAT
TCAGATGTTCCGTGCTTAAAACAATTAATAGATACTTATAATGAGTATAAAACAACTGTATTAGGTGTTCAAAAGATAGC
TAAAGAAGATACTAATAAATATGGTATATTGGATGTAAAACATATCGAAGATAGAGTATATAAAGTTAAAGATATGGTTG
AAAAACCTGCAATTGAAGAAGCTCCATCTGATATAGCTATACTTGGAAGATATATAATAACTCCTGCAATATTTAGTATA
TTAGAGAAACAGACACCTGGTAAAGGTGGAGAGATACAACTGACAGATGCACTTCAAACTCTTGGAAAACAAGAGGCTAT
TTATGCTTATAACTTTGAAGGTAGAAGATATGATGTGGGAGATAAGATTGGTTTTTTAGAGGCAACAATAGACTTTGCTC
TAAAGAGAGAAAATTTAAAAGATGATTTAATGGACTATATGAGAAAAAAAGTAAGTGAAAAATAA

Protein sequence : 
MKKKYKYGILIWYNRKFTKKGEKMQMTVKKAIIPAAGLGTRFLPATKSQPKEMLPIVDKPTLQYIIEEAIESGIEEILII
TGRNKKSIEDHFDKSVELELELEQKGKTEMLEMVRDISNMVNIHYIRQKEPKGLGHAIYCAKSFIGDEPFAVLLGDDIVD
SDVPCLKQLIDTYNEYKTTVLGVQKIAKEDTNKYGILDVKHIEDRVYKVKDMVEKPAIEEAPSDIAILGRYIITPAIFSI
LEKQTPGKGGEIQLTDALQTLGKQEAIYAYNFEGRRYDVGDKIGFLEATIDFALKRENLKDDLMDYMRKKVSEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 1e-76 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gtaB YP_003215574.1 UTP--glucose-1-phosphate uridylyltransferase VFG0964 Protein 1e-69 55