Gene Information

Name : ctfA (CD196_2518)
Accession : YP_003215536.1
Strain : Clostridium difficile CD196
Genome accession: NC_013315
Putative virulence/resistance : Unknown
Product : butyrate--acetoacetate CoA-transferase subunit A
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1788
EC number : -
Position : 2926692 - 2927348 bp
Length : 657 bp
Strand : +
Note : -

DNA sequence :
ATGAATAAAATAGTTAGCATTGATGAAGCTCTATCTCATGTAAAAGATGGAGATACAATAATGGTTGGTGGATTCATGGC
CAATGGTTCACCAGAAAATTTAATTGATTATTTATGTAGTAAAAATATAAAAGATTTGACACTAATTTGCAATGATACTG
GCTTTATTGACAAAGGAGTTGGCAAAATGGTTGTAAATAAGCAATTTAAAAAGATAATTGCTTCTCATGTAGGATTAAAT
AAAGAAACTGGAAGACAAATGAACAACAATGAAACAGATGTTGAGTTAGTTCCTCAGGGAACTCTTGCTGAACAAATACG
TGCAGCTGGTTATGGTCTAGGAGGTATACTCACACCGACTGGTATTGGTACTCTTGTTGAGGAGGGAAAGCAAAAAATTG
TTGTCGATAGCAAAGAATACCTTCTTGAAAAACCAATTTATGCAGATGTTGCTCTTCTATTTGCATCAAAGGTCGATAAA
GCAGGTAATCTAGTTTATAAAGGCTCTATGAACAATTTTAATAATTTAATGGCATCTGCTGCCAAAATTACAATAGTTGA
AGCAGATGAAATCGTTGAAATTGGTGACATTGACCCAAATGAAGTTAATACACCAGGTATTTTTGTGAATTACATCGTTG
AAGGAGGTAATTTATAA

Protein sequence :
MNKIVSIDEALSHVKDGDTIMVGGFMANGSPENLIDYLCSKNIKDLTLICNDTGFIDKGVGKMVVNKQFKKIIASHVGLN
KETGRQMNNNETDVELVPQGTLAEQIRAAGYGLGGILTPTGIGTLVEEGKQKIVVDSKEYLLEKPIYADVALLFASKVDK
AGNLVYKGSMNNFNNLMASAAKITIVEADEIVEIGDIDPNEVNTPGIFVNYIVEGGNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 1e-38 56