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Name : CD196_2252 (CD196_2252) Accession : YP_003215272.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2614832 - 2615659 bp Length : 828 bp Strand : - Note : - DNA sequence : ATGTCTAGGAAGTATAGTATTTCTAGTATGTGTAAGTTGATAGGTGTGTCAAGAAGCGGTTACTATAAATGGCTAAGTTA TTCTAAAAAATCTTCCGATAGGGGTATCAAAGATAGAATTATTAAGGATTATATAATTGAAATACATAAAAAATATAGAG GAACTTACGGTAGAAAAAGAATTTGTACTTATTTAAATAAAATACTTGATAGCCCTATTAATCATAAGAAAGTATATAGG TTGATGAAAGAACTAGGAATTAAATCTATTATTAGAAAGAAAGTATATAGACGTAAGTTTAAATCATATGAGGTATATGA TAATATATTAAATCGTGAATTTAGAGCTAATCAACCATTAGAAAAAATTTGTATGGATATAACATACATACCTATTGGTA AAAAATTCTTATACATGAATGTAGCCAAAGATTTATTTAATGGTGAAATAGTGGCATATGAGATAAGTACAAAAATGGAT ACTAAATTAGTTAATAAAACAGTAAATCAACTAATAAATATGAATTTAGCTAAAGATTGTATTTTACATACAGATCAAGG TTCACAATATACAAGTAGATCTTACTCTAAAAGGCTTAAAGATAATGGTATTATACAATCTATGTCCCGAAGGGGCAACT GCTGGGATAATGCTCCTATAGAAAGTTTTTTCAGTCATTTTAAATCTGAATTAATATATTTAATTGATACTACAGATCCA AAGGAAATGATTAGTCTAATAAATGATTATATTTATTTTTATAATAATGAAAGAATACAATTAAAAAACGGAATGAGTTC GATTGAATATCGAACTCATTCCGCATAA Protein sequence : MSRKYSISSMCKLIGVSRSGYYKWLSYSKKSSDRGIKDRIIKDYIIEIHKKYRGTYGRKRICTYLNKILDSPINHKKVYR LMKELGIKSIIRKKVYRRKFKSYEVYDNILNREFRANQPLEKICMDITYIPIGKKFLYMNVAKDLFNGEIVAYEISTKMD TKLVNKTVNQLINMNLAKDCILHTDQGSQYTSRSYSKRLKDNGIIQSMSRRGNCWDNAPIESFFSHFKSELIYLIDTTDP KEMISLINDYIYFYNNERIQLKNGMSSIEYRTHSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0101 | NP_763656.1 | transposase | Not tested | SCCpbp4 | Protein | 3e-27 | 45 |
| EFAU085_00737 | YP_008394261.1 | ISEnfa3, transposase | Not tested | Not named | Protein | 2e-30 | 43 |
| tnp | BAG06206.2 | transposase for ISSau4-like | Not tested | Type-VII SCCmec | Protein | 1e-32 | 42 |
