Gene Information

Name : CD196_2149A (CD196_2149A)
Accession : YP_003215171.1
Strain : Clostridium difficile CD196
Genome accession: NC_013315
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2499911 - 2500111 bp
Length : 201 bp
Strand : +
Note : -

DNA sequence :
ATGCCCAAATTCATTTGTAACCTAAAAAAATATAGACAATTAAAAGAATTAACTCAAGAACAATTAGCAGAAAAAGTAGG
AGTTAGAAGAGAAACCATTATGCGTTTAGAAGCAGGAAAGTATAATCCTTCTTTGAAATTAGCAATAGATATATCAAAAA
TAGTAGATACACCTATTGATGAATTGTTTATTTTTGATTAG

Protein sequence :
MPKFICNLKKYRQLKELTQEQLAEKVGVRRETIMRLEAGKYNPSLKLAIDISKIVDTPIDELFIFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-06 43
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-06 43
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-07 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CD196_2149A YP_003215171.1 transcriptional regulator VFG2168 Protein 1e-06 43
CD196_2149A YP_003215171.1 transcriptional regulator VFG2175 Protein 1e-06 43