|
Name : kdpC (CD196_1516) Accession : YP_003214543.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit C Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2156 EC number : - Position : 1765395 - 1766036 bp Length : 642 bp Strand : + Note : one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex DNA sequence : ATGGAGGATATAAAAATGAAAACATTAAAGCCAGCATTACTTGTAAGTATTGTATTGTTAGTTGTTTGTGGACTTGTATA TCCACTTGTTTTGACAGGTGTAAGCCAAGTTGCATTTAAAGATAAAGCCAATGGAAGTATGATAGAAGTAAATGGTGTAA AAGTAGGTTCAGAACTTATTGGTCAAAGCTTTACAGATGCGAGATTCTTTAAGGGAAGAGTATCATCAGTAAACTATAAT ACTTATACAAAAGAAGATTTAGTACCAGATAAAGATGGAAATGCATCTTATGGAGGTGTATCATCAGGGTCTTTTAATTA TGGAGCTACAAATCCAGAACTTCATGATAGAGTACAAAAAGATATAGAAAAGTTTTTAAAGGATAATCCAACTGTCAAAA GAGAGGATATACCAACAGATTTACTTACAGCATCAGGTTCAGGACTTGACCCTAATATAAGTCCAGCCTCTGCAAAAATT CAGATACCAGCTATAGCAAAAGCGTCTGGAATATCAGAAAGTAAATTACAAAAAATTGTAGATGATAATACTTCCAAAAA ACTTTTTGGAGTTTTAGGTGAAGATAGAGTTAATGTACTAAAGGTTAATATAGAGGTCGCAAAAATATTAGGTCTTATAT AG Protein sequence : MEDIKMKTLKPALLVSIVLLVVCGLVYPLVLTGVSQVAFKDKANGSMIEVNGVKVGSELIGQSFTDARFFKGRVSSVNYN TYTKEDLVPDKDGNASYGGVSSGSFNYGATNPELHDRVQKDIEKFLKDNPTVKREDIPTDLLTASGSGLDPNISPASAKI QIPAIAKASGISESKLQKIVDDNTSKKLFGVLGEDRVNVLKVNIEVAKILGLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpC(SCCmec) | NP_370598.1 | potassium-transporting ATPase subunit C | Not tested | Type-II SCCmec | Protein | 9e-29 | 42 |
| kdpC | YP_190028.1 | potassium-transporting ATPase subunit C | Not tested | Type-II SCCmec | Protein | 3e-30 | 41 |
