Gene Information

Name : kdpC (CD196_1516)
Accession : YP_003214543.1
Strain : Clostridium difficile CD196
Genome accession: NC_013315
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit C
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2156
EC number : -
Position : 1765395 - 1766036 bp
Length : 642 bp
Strand : +
Note : one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex

DNA sequence :
ATGGAGGATATAAAAATGAAAACATTAAAGCCAGCATTACTTGTAAGTATTGTATTGTTAGTTGTTTGTGGACTTGTATA
TCCACTTGTTTTGACAGGTGTAAGCCAAGTTGCATTTAAAGATAAAGCCAATGGAAGTATGATAGAAGTAAATGGTGTAA
AAGTAGGTTCAGAACTTATTGGTCAAAGCTTTACAGATGCGAGATTCTTTAAGGGAAGAGTATCATCAGTAAACTATAAT
ACTTATACAAAAGAAGATTTAGTACCAGATAAAGATGGAAATGCATCTTATGGAGGTGTATCATCAGGGTCTTTTAATTA
TGGAGCTACAAATCCAGAACTTCATGATAGAGTACAAAAAGATATAGAAAAGTTTTTAAAGGATAATCCAACTGTCAAAA
GAGAGGATATACCAACAGATTTACTTACAGCATCAGGTTCAGGACTTGACCCTAATATAAGTCCAGCCTCTGCAAAAATT
CAGATACCAGCTATAGCAAAAGCGTCTGGAATATCAGAAAGTAAATTACAAAAAATTGTAGATGATAATACTTCCAAAAA
ACTTTTTGGAGTTTTAGGTGAAGATAGAGTTAATGTACTAAAGGTTAATATAGAGGTCGCAAAAATATTAGGTCTTATAT
AG

Protein sequence :
MEDIKMKTLKPALLVSIVLLVVCGLVYPLVLTGVSQVAFKDKANGSMIEVNGVKVGSELIGQSFTDARFFKGRVSSVNYN
TYTKEDLVPDKDGNASYGGVSSGSFNYGATNPELHDRVQKDIEKFLKDNPTVKREDIPTDLLTASGSGLDPNISPASAKI
QIPAIAKASGISESKLQKIVDDNTSKKLFGVLGEDRVNVLKVNIEVAKILGLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpC(SCCmec) NP_370598.1 potassium-transporting ATPase subunit C Not tested Type-II SCCmec Protein 9e-29 42
kdpC YP_190028.1 potassium-transporting ATPase subunit C Not tested Type-II SCCmec Protein 3e-30 41