Gene Information

Name : kdpA (CD196_1514)
Accession : YP_003214541.1
Strain : Clostridium difficile CD196
Genome accession: NC_013315
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit A
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2060
EC number : -
Position : 1761633 - 1763309 bp
Length : 1677 bp
Strand : +
Note : catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions

DNA sequence :
ATGGTGCAGATAGTAATAGTGTTAGCGATTTTTATGATTTTAGTAATACCTATGGGCAAGTATTTATATCATATAGCTAC
TAATCAAAAAACATTTGGAGATAGACTATTTGATAAAGTGGACAATTTTATATATAAGGTATGTAGTATAGATAAGAAAA
AAGAAATGAACTGGAAACAGTATGCATTAGCTTTATTATTTACAAATGCAGTTATGGTATTTATAGGATATATCATACTT
AGAACTCAAAGTATGCATATTTTTAATCCAAGTGGAATTAAAAGTATGGAACAAGGACTATCATTTAATACAATAATAAG
TTTTATGACAAATACAAATCTTCAACATTATTCAGGTGAATCAGGACTTTCATACTTTAGTCAGATGACAGTGATAATAT
ATATGATGTTTACATCAGCAGCAACAGGATATGCGGCTGCTATGGCATTTGTAAGAGGTCTAGTCGGTAAAAAGAAAACA
TTGGGAAATTTTTATGTAGATTTAATTAGGATAACAACAAGAGTACTTTTACCAGGAGCTTTAATTATTGGGCTTATATT
AGTTACACAAGGAGTACCACAAACTTTTGCTGGGACAGAAACAGTGACTACTATAGAAGGAAAGCTTCAAGATATAGCTA
GAGGTCCTGTGGCAGCTCTTGAATCAATAAAACATTTAGGAACAAATGGTGGTGGATTCTTTGGTTCAAATTCATCACAC
CCATTTGAAAATCCAACAATAATATCAAATATAGTAGAAATATTATCTATGATGATATTACCAGGAGCTTGTGTTGTTGC
ATTCGGTCACATGATAAAGAATAAAAAACAAGGTTGGGTTGTGTTTGGCGCAATGTCAATCATATTTTTAATAGGTCTAG
TAGTGTGCTTTAAAGCAGAAAGTGCAGGAAACCCTATTTTATCACAATTAGGGCTTAATCAAAGTATGGGAAGTATGGAA
GGTAAGGAAGTTAGATTTGGTATAGCACAATCATCATTATTCACAACAGTGACTACTTCCTTTACGACAGGTACAGTTAA
TAATATGCATGATACACTGACTCCTTTAGGAGGATTAGTACCACTTTTAAATATGATGCTAAATGTAGTATTTGGTGGTA
AAGGCGTAGGTCTGATGAATATGTTGATGTACGCTATAATAGCAGTATTCTTATGTGGATTAATGGTAGGAAGAACACCA
GAGTTTTTAACTAAGAAAATCGAAGGAAAAGAAATGAAGCTTATTGCTTTACTTATTATATTACATCCACTTTTAATACT
AATGTTCTCTGGTCTTTCAGTAGCAATACCAGCAGGGCTTGAAGGAATTTCAAATCCTGGATTCCATGGATTATCACAGG
TATTGTATGAGTTTGCATCTTCAGCAGCCAATAATGGTTCAGGATTTGAAGGTCTAGGAGATAACACTATGTTTTGGAAT
ATAACAACAGGTATAGTTATGTTCTTTGGAAGATATGTGTCTATTATAGTACTACTAGCAATATCAAGTTTGTTAGCATC
TAAAAAAGCTGTAAATGAAAGTATAGGAACACTTAGAACGGATAATTTTACATTTACAATAGTTTTAGTACTTGTTGTTT
TAATTGTTGGTGCTTTAACATTTTTCCCAGCCTTAGCGCTTGGACCTATTTCGGAGCATCTAGTGTTGTGGCACTAA

Protein sequence :
MVQIVIVLAIFMILVIPMGKYLYHIATNQKTFGDRLFDKVDNFIYKVCSIDKKKEMNWKQYALALLFTNAVMVFIGYIIL
RTQSMHIFNPSGIKSMEQGLSFNTIISFMTNTNLQHYSGESGLSYFSQMTVIIYMMFTSAATGYAAAMAFVRGLVGKKKT
LGNFYVDLIRITTRVLLPGALIIGLILVTQGVPQTFAGTETVTTIEGKLQDIARGPVAALESIKHLGTNGGGFFGSNSSH
PFENPTIISNIVEILSMMILPGACVVAFGHMIKNKKQGWVVFGAMSIIFLIGLVVCFKAESAGNPILSQLGLNQSMGSME
GKEVRFGIAQSSLFTTVTTSFTTGTVNNMHDTLTPLGGLVPLLNMMLNVVFGGKGVGLMNMLMYAIIAVFLCGLMVGRTP
EFLTKKIEGKEMKLIALLIILHPLLILMFSGLSVAIPAGLEGISNPGFHGLSQVLYEFASSAANNGSGFEGLGDNTMFWN
ITTGIVMFFGRYVSIIVLLAISSLLASKKAVNESIGTLRTDNFTFTIVLVLVVLIVGALTFFPALALGPISEHLVLWH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 2e-88 53
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-88 52
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 1e-88 52
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-88 52
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-88 52
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 2e-88 52