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Name : CD196_1450 (CD196_1450) Accession : YP_003214478.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Virulence Product : virulence-associated protein e Function : - COG functional category : R : General function prediction only COG ID : COG5545 EC number : - Position : 1688014 - 1690431 bp Length : 2418 bp Strand : + Note : - DNA sequence : ATGGATATAAAGGCCAGTGAAATTGAACACATAAATGTAAGACATGATGGCCAACTCATGCTGGCCATAGGAAAAAATAA ATTAGAAACACATTGGAAAAATAAAAGTATTTTATGGTCCGAACTTGTAAATAGATTAAGTAAAACATTAAGAACTCAAG AAACATATACAGAATATAGGAAGATGTCAAAGACTGAAAAAGATAGAGTTAAAGATGTTGGTGGATTTGTAGGTGGAAGC TTAAAAAATGGAAGACGAAAAGCAGAGAATATTGCAAATAGAAGTATTATAACTTTAGATATAGATTATGCGAATAAAGA TATATGGGAGGATATAACATTATTAAATGATTATGCTTGTCTTATGTATTCTACGCACTCACATACTGAGAATAATCCCA GATATAGACTTGTAATACCTTTAACTAGACCAGTACTACCAGAAGAATATCAAGCAATTTCCAGGATGATAGCAGATACT ATAGGAATAGATATGTTTGATGATACTACATATCAACCTCATAGACTTATGTATTTTCCAAGTACTTCAATTGATGGAGA CTATATATTTAAATTTCAAGATGGAGAGTTTTTAAACCCAAATGAAATACTAGATTTATATTTAGACTGGACAGATGTAA GCTATTGGCCAGAAAGTTCGAGGGAGAGGCAAAAGTTTAATACACAATTAAAAAAACAACAAGACCCTATTGAAAAGGCT GGAATTATAGGTGCATTTTGCAGGTCCTATAGTATAAAAGAAACTATAGAAACTTTCTTAAATGAAGTATATATTCCTGG TATTGATGAAACCAGGTATACATATTCAGAAGGTAGTACAAGTGGTGGAGTAGTTATTTATGATGACAAGTTTTCATATA GTCATCATGGTACAGACCCAGCAAGCGGAATTTTATGCAATGCTTTTGATTTAGTTAGGATACATAAATTTGGTGAACTT GATGAAGATGCTAAACCCGAAACGCCTGTAAACAGATTACCTTCATTTACTCGAATGAGCGAATTTGCAAGCAGTGACAC TAAAGTACGAAAGACTATAGGAAGAGAAAACCTTGATAAAGCTAAGGATGATTTTGGTGATATAGATTTTGAAGATGATG AATGGTTAACTAGGTTAGATTATGACAATAAGGGAAGTTATAAGAAAACAACAAACAATATCTTAATGTTTATAGAAAAT GACCCATATTTGAAAGGAAAAATAGCTTATAATGAATTTTCAAATAGAGCTGTCGTTTTAGGTAAGTTACCTTGGAGAAA AGATGATAAATTAAATGATTGGAATGATAGTGATGATTCTGGGCTTAGACATCATATAGAAACAATTTACAATATCTCAT CACCATCAAAAGTAAATGATGCTCTAATAATTGCTTTTGAAAATAATACTTTTCATCCTATAAAAGATTATTTAAATTCT TTAAAGTGGGATGGCATTAAGAGAGTGGATACACTTTTAATTGACTATTTAGGTGCAGAAGATAACCACTATACAAGGAC TATAATAAGAAAAGTTTTAGTAGCAGCAGTAGCAAGAGTATTTAATCCAGGAATAAAGTTTGATAATATGATGGTTTTAT CTGGTCCTCAAGGAATGGGAAAAAGTACTTTTATTAAAAAACTTGGTGGAGACTGGTATTCTGATAGTTTAACTACTGTA CAAGGTAAAGAAGCGTATGAACAATTACAAGGAGTATGGTTGCTGGAAATGGGTGAAATGATGGCTACTAAAAAAGCAGA TATTGAGGCAGTTAAGCATTTTCTAAGCAAATCAGAGGATATATATAGGGTCGCATATGGGAAGAGAACATCAAGGTTTT TACGTCAATGTGTAGTTATAGGAACAACTAATGATAAAGAATTTTTAAGAGATAAGACCGGGAATAGAAGGTTTTGGCCA ATAGATACAGGAGTAAAGAAGGTTAACAAGAGTATATTTAATGGTCAACTTGATAATGAAAGAAATCAAATTTGGGCAGA AGCAGTAGAATTATGTAAAGCCAATGAACAGCTATATCTATCAGATGAGGAGAAAAAAGAAGCTGAAAGACAACAAAGAA CTCACTCAGAAGAAAATGCTAAATCTGGAATTATCGAAGAGTATCTAAATAAACCTATTACTGAGAATTGGTATGATTTA AGTATTTCAGAAAAGAGAGAATATATTCATGGTTCAGATTTTGGTGATTTAAAAGAAGGAACAATATTAAGAGAAAAAAC GTGTGTTATGGAGATATGGGTTGAGCTATTTAATGGAGAACCTAAACAACTCACGCCTATCTTATCAAGAGAAATTAATG ATATATTAAAAGGATTAGATGATTGGATATCATATAATGGAAATTTAAGGTTTGGGAAAATATATGGTAGGCAGAGAGCT TATGTACGTAAAAGTTAG Protein sequence : MDIKASEIEHINVRHDGQLMLAIGKNKLETHWKNKSILWSELVNRLSKTLRTQETYTEYRKMSKTEKDRVKDVGGFVGGS LKNGRRKAENIANRSIITLDIDYANKDIWEDITLLNDYACLMYSTHSHTENNPRYRLVIPLTRPVLPEEYQAISRMIADT IGIDMFDDTTYQPHRLMYFPSTSIDGDYIFKFQDGEFLNPNEILDLYLDWTDVSYWPESSRERQKFNTQLKKQQDPIEKA GIIGAFCRSYSIKETIETFLNEVYIPGIDETRYTYSEGSTSGGVVIYDDKFSYSHHGTDPASGILCNAFDLVRIHKFGEL DEDAKPETPVNRLPSFTRMSEFASSDTKVRKTIGRENLDKAKDDFGDIDFEDDEWLTRLDYDNKGSYKKTTNNILMFIEN DPYLKGKIAYNEFSNRAVVLGKLPWRKDDKLNDWNDSDDSGLRHHIETIYNISSPSKVNDALIIAFENNTFHPIKDYLNS LKWDGIKRVDTLLIDYLGAEDNHYTRTIIRKVLVAAVARVFNPGIKFDNMMVLSGPQGMGKSTFIKKLGGDWYSDSLTTV QGKEAYEQLQGVWLLEMGEMMATKKADIEAVKHFLSKSEDIYRVAYGKRTSRFLRQCVVIGTTNDKEFLRDKTGNRRFWP IDTGVKKVNKSIFNGQLDNERNQIWAEAVELCKANEQLYLSDEEKKEAERQQRTHSEENAKSGIIEEYLNKPITENWYDL SISEKREYIHGSDFGDLKEGTILREKTCVMEIWVELFNGEPKQLTPILSREINDILKGLDDWISYNGNLRFGKIYGRQRA YVRKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| MW1408 | NP_646225.1 | hypothetical protein | Not tested | ¥ÕSa2 | Protein | 0.0 | 50 |
| SAUSA300_1410 | YP_494107.1 | virulence-associated protein E | Virulence | ¥ÕSa2 | Protein | 0.0 | 50 |
| SAOV_0312 | YP_005735829.1 | virulence-associated protein E | Virulence | ¥ÕSa1 | Protein | 0.0 | 50 |
| SH1781 | YP_253696.1 | hypothetical protein | Not tested | ¥ÕSh1 | Protein | 0.0 | 49 |
