Gene Information

Name : CD196_1446 (CD196_1446)
Accession : YP_003214474.1
Strain : Clostridium difficile CD196
Genome accession: NC_013315
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1683308 - 1684474 bp
Length : 1167 bp
Strand : +
Note : -

DNA sequence :
ATGCCATTACAACATGCAAGACTTAGTGCGAGTGGAGCCCATAGATGGCTTCACTGCACTCCTAGTATAAAATTAGAAGA
AAACTATCCACCATCAACTAGTATATATGCAGAAGAAGGAACAGTTGCACATGAATTAGCAGAAGTTAAATTAATGCTAG
AGTATGAAAAAATAAGTGAAAAGGCATATAATGCAAGAATTAAAAAGATACAGAAAAGTGAGTATTATAACTCTGAAATG
GAGGACTATATACAATCTTATGTTGAGAATGTAGTTGAATTAGTAAATGATAGTAAAGCTATATGTGATGATGTAATAGT
GATGTTAGAAGAAAGACTCGATTTTAGCGAGTGGGTTCCAGAAGGATTTGGAACAGGAGACGTTGTTGTAATATCTGATG
GTATACTTCAAGTTATAGACCTAAAGTATGGAAAAGGTTTAGAAGTTTCAGCTATAGAGAATCCTCAACTTAGACTATAT
GGTTTAGGGGCATATAATCAGTTTGAAATGCTATATGATATTGATTTAATTAAAACAACAATAATTCAACCTAGACTTGA
TAACATATCAAGTGAAGAAATAGAAGTTACTAAATTACTTACATGGGCAGATAATGTTAAGAAGAAGGCTCAAATGGCTT
TTAATGGTGAAGGAGAGTTTGTAAGTGGCAGTCATTGTGGATTTTGTAGAGCTAAAAATGATTGCAGAAAAAGAGCTGGG
GATAACCTTAAACTAGCTAGAAAATATGATTTTGCTGACACATTTGCTCTTAATAAATATGAGATAGCAGATATTTTAGG
TTTTGCTAAGAATATACAAGATTGGTTAAAGGATGTTCAAAGTTATGCACTAGAACAAGCTGAAAAGCATGGTGTTAAAT
ATCCAGGATATAAGCTTGTAGAAGGCAGAAGTAATAGAAAGTATGTAGATGAGCAAGAAGTTGCTAAGGTTTTATTAAAT
TCAGATTATGATGAAGAAAAAATTTATAAGCCAAGGACCTTAAAAGGAATTAGTGATATGGAGAAAGCTATAGGTAAAAA
GAGTTTTGCTAAACTACTAAGTGATTTAATTATAAAACCAGTTGGAAAAGCTACTTTAGTAGTAGAAAGTGATAAAAGGT
CAGAAATTAATAGTATAGATTCAGCGAAAAAAGATTTTGAAATATAA

Protein sequence :
MPLQHARLSASGAHRWLHCTPSIKLEENYPPSTSIYAEEGTVAHELAEVKLMLEYEKISEKAYNARIKKIQKSEYYNSEM
EDYIQSYVENVVELVNDSKAICDDVIVMLEERLDFSEWVPEGFGTGDVVVISDGILQVIDLKYGKGLEVSAIENPQLRLY
GLGAYNQFEMLYDIDLIKTTIIQPRLDNISSEEIEVTKLLTWADNVKKKAQMAFNGEGEFVSGSHCGFCRAKNDCRKRAG
DNLKLARKYDFADTFALNKYEIADILGFAKNIQDWLKDVQSYALEQAEKHGVKYPGYKLVEGRSNRKYVDEQEVAKVLLN
SDYDEEKIYKPRTLKGISDMEKAIGKKSFAKLLSDLIIKPVGKATLVVESDKRSEINSIDSAKKDFEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
MW1427 NP_646244.1 hypothetical protein Not tested ¥ÕSa2 Protein 1e-81 47
SAUSA300_1425 YP_494122.1 hypothetical protein Not tested ¥ÕSa2 Protein 1e-81 47
SEQ_2075 YP_002747290.1 phage protein Not tested ¥ÕSeq4 Protein 2e-76 46
Cp1002_1449 YP_005681715.1 Protein p51 Not tested PiCp 5 Protein 3e-53 42
CpC231_1448 YP_005683812.1 Protein p51 Not tested PiCp 5 Protein 3e-53 42
CpI19_1455 YP_005685898.1 Protein p51 Not tested PiCp 5 Protein 3e-53 42