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Name : metQ (CD196_1364) Accession : YP_003214392.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : D-methionine ABC transporter substrate-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1464 EC number : - Position : 1587026 - 1587817 bp Length : 792 bp Strand : + Note : - DNA sequence : ATGAAATTAAAGAAATTATTATCAGTAGCATTGGTGTCAGCAATAGCAATATCAGCAGTAGGTTGTTCAAACAAAGAGGA TAAAAAAATACTAGTAGGAGCTTCATCAAATCCACATGCAAAGATATTGGAAGTTGCAAAACCTTTGTTAAAAGAAAAAG GATATGATTTAGAAGTAAAAATATTTGATGATTATGTACTTCCAAATACAGCTTTAGATGAAGGGTCTTTGGATGCTAAC TTCTTTCAACATATTCCATTTTTAGAGGAAACTGTGAAGGAGAAAGGATATAAACTTACTTATACATCTAAAGTTCATAT AGAGCCAATGGGATTCTATTCAGAAAAAGTTAAGTCATTAGATGAATTAAAAGATGGAGCTGTTATAGCTGTGCCAAATG ATGCAACTAATGGAGCTAGAGCACTTAAATTATTAGCAAAAAATAAATTGATAGAAGTAAAAGATGGAGAGCTTATAACT AAAAAAGATATAACTAAAAATCCTAAAAATATAGTAATAAAAGAAATGAATGCAGAGCAATTACCAACAGTATTAAAAGA TGTTGACGGAGCAGTAATAAATTCTAATTATGCTTTAACAGCTAACTTAAATCCTACTAAGGATGCAATAGTAATAGAAT CAAGTGATTCTCCATATGTAAATATAATAGCTTGTAGAGAAAATAATAAAGATAGTGATAAGATTAAGGCTTTATCAGAG GCTATGAATAGTAAAGAAGTTAAAAAATTTATACAAGATGAATATAAAGGAAGTATAGTTCCAGCTTTTTAA Protein sequence : MKLKKLLSVALVSAIAISAVGCSNKEDKKILVGASSNPHAKILEVAKPLLKEKGYDLEVKIFDDYVLPNTALDEGSLDAN FFQHIPFLEETVKEKGYKLTYTSKVHIEPMGFYSEKVKSLDELKDGAVIAVPNDATNGARALKLLAKNKLIEVKDGELIT KKDITKNPKNIVIKEMNAEQLPTVLKDVDGAVINSNYALTANLNPTKDAIVIESSDSPYVNIIACRENNKDSDKIKALSE AMNSKEVKKFIQDEYKGSIVPAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 8e-44 | 47 |
| nlpA | AAW51766.1 | NlpA | Not tested | AGI-3 | Protein | 2e-36 | 43 |
