Gene Information

Name : metN (CD196_1362)
Accession : YP_003214390.1
Strain : Clostridium difficile CD196
Genome accession: NC_013315
Putative virulence/resistance : Resistance
Product : D-methionine ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1135
EC number : -
Position : 1585361 - 1586341 bp
Length : 981 bp
Strand : +
Note : -

DNA sequence :
ATGGGAGGAAATTTTATGATTAGCATAAAAAATGTTAATAAGTATTATGGAAAGATTCAAGTGCTTAAAGATGTAAGTAT
TGAAATAGAATCTGGAGAAATTTTTGGAATAATAGGTCATAGTGGTGCAGGGAAATCAACACTACTGAGATGTATAAACG
GATTAGAAGAATACCAAGAAGGCAGTGTACTTGTTTCTGATAAAGAAGTAAAGTCATTGAATGAAAAGCAAATGAGAGAT
TTAAGAAAAGAGTTAGGAATGATTTTTCAACACTTTTCATTGCTTGAAAGAAAAACTGTATTTGATAATGTAGCATTGCC
ATTAGAATGTTTTGGATACTCAAAGGCAGAAATTAAAAAAAGAGTTTTAGAGTTATTAGAAGTAGTTGGAATATCTGAAA
AGAAAAATGATAAACCCAGAAATCTAAGTGGCGGACAAAAACAAAGGGTTGCAATTGCTAGAGCTTTAGCACTAAACCCA
CAAGTACTTCTTTGTGATGAAGCAACTTCAGCATTAGACCCAAATACTACAAAGTCAATTCTTTCATTGCTTGAAGATAT
AAATAAAAAATTGGGAATAACAATAATAGTTGTAACTCATCAAATGGAAGTTATAAAGCAGATTTGTGGAAGAGTAGCAA
TAATGGAAAATGGAGAAGTATTAGAGGTAGGAGATACAGAAGAAATATTCTTAAGAAATACTAAAGGACTTAGAAAATTA
ATAGGTGAAGAAAGTATAATATTGCCAAAAGGAACAAATATAAAGATACTATTCCCTAAAGATATTTCTAATGAAGCTAT
TATTACGACTATGGCAAGAGAACTAAATATAGATGTGTCTATAATATTTGGGAAATTAGAACAATTTAAAGATGATATTT
TAGGTTCACTTATTATAAACATTTCAGATAAAAGTGGAGAGCACGTAAAACAATATCTAACTAGTAAGGGCATAAGATGG
GAGGAAATGATAAATGAATAG

Protein sequence :
MGGNFMISIKNVNKYYGKIQVLKDVSIEIESGEIFGIIGHSGAGKSTLLRCINGLEEYQEGSVLVSDKEVKSLNEKQMRD
LRKELGMIFQHFSLLERKTVFDNVALPLECFGYSKAEIKKRVLELLEVVGISEKKNDKPRNLSGGQKQRVAIARALALNP
QVLLCDEATSALDPNTTKSILSLLEDINKKLGITIIVVTHQMEVIKQICGRVAIMENGEVLEVGDTEEIFLRNTKGLRKL
IGEESIILPKGTNIKILFPKDISNEAIITTMARELNIDVSIIFGKLEQFKDDILGSLIINISDKSGEHVKQYLTSKGIRW
EEMINE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 4e-52 44
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 2e-51 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metN YP_003214390.1 D-methionine ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-26 41