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Name : CD196_1213 (CD196_1213) Accession : YP_003214243.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Virulence Product : lantibiotic ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : - Position : 1424173 - 1424889 bp Length : 717 bp Strand : + Note : - DNA sequence : ATGAAAATTATGAATAATTATATTTTGCAGGTAAAAGGAGTTTCTAAAAAATTTAAGGAGCAGATGGCAGTTGATAATAT TTCACTAGCAATTAAATCTAATTCTATATATGGATTATTAGGACCAAATGGAGCTGGGAAATCTACTTTATTAAAAATGA TAACTGGGATTTTAAATCCAACTTCAGGAAAAATAATGTTTGAGGGACATAGATGGACTAGAAAGGATTTATCAAATATT GGTTCTCTTATTGAGTCTCCTGCTATATATGAGAATTTAACAGCACGAGAAAATTTAAAAGTCCATACTACTTTACTTGG TCTTCCTGACTCTCGAATTGAAGAAGTTTTAGAGACTGTCGACTTAAGAGATACTTTTAAAAAGCGTTCAGGTCAATTCT CTCTAGGTATGAAGCAACGTCTTGGTATTGCTATTGCATTATTAAATCACCCAAAACTTTTAATCTTAGACGAGCCTACA AATGGTCTTGACCCTATTGGTATTGAAGAACTTAGAAAATTGATTCGTTCTTTTCCAAAACAAGGAATTACAGTTATTTT ATCAAGCCATATCTTGTCTGAAGTTGAACAAGTCGTAGATGAAATCGGAATAATTTCTAATGGAGTAATTGGTTATCAAG GAGAAGTATCAAAAGAACAAAACTTAGAAAAACTTTTTATGAAAGTTGTAGCTGAAAATAGAAAGAGAGGGGAGTAA Protein sequence : MKIMNNYILQVKGVSKKFKEQMAVDNISLAIKSNSIYGLLGPNGAGKSTLLKMITGILNPTSGKIMFEGHRWTRKDLSNI GSLIESPAIYENLTARENLKVHTTLLGLPDSRIEEVLETVDLRDTFKKRSGQFSLGMKQRLGIAIALLNHPKLLILDEPT NGLDPIGIEELRKLIRSFPKQGITVILSSHILSEVEQVVDEIGIISNGVIGYQGEVSKEQNLEKLFMKVVAENRKRGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sboF | YP_006309913.1 | SboF | Not tested | FWisland_1 | Protein | 7e-43 | 50 |
| cdd4 | CAA63569.1 | - | Not tested | PaLoc | Protein | 5e-44 | 50 |
| bsaF | NP_646577.1 | hypothetical protein | Not tested | vSa¥â | Protein | 1e-42 | 49 |
| epiF | YP_494453.1 | lantibiotic epidermin immunity protein F | Not tested | vSa¥â | Protein | 1e-42 | 49 |
| epiF | YP_186701.1 | epidermin immunity protein F | Virulence | vSa¥â | Protein | 1e-42 | 49 |
| bsaF | YP_001332745.1 | lantibiotic immunity protein F | Not tested | vSa¥â | Protein | 2e-42 | 49 |
| SPN23F_09830 | YP_002510959.1 | lantibiotic transport ATP-binding protein | Not tested | PPI-1 | Protein | 1e-33 | 45 |
| CD241_0087 | YP_005124356.1 | ABC transporter ATP-binding protein | Not tested | Not named | Protein | 1e-40 | 44 |
| DIP0090 | NP_938487.1 | ABC transporter ATP-binding protein | Not tested | Not named | Protein | 6e-41 | 44 |
