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Name : CD196_1094 (CD196_1094) Accession : YP_003214125.1 Strain : Clostridium difficile CD196 Genome accession: NC_013315 Putative virulence/resistance : Unknown Product : integrase, catalytic region Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1292920 - 1293819 bp Length : 900 bp Strand : + Note : - DNA sequence : GTGGTAATTACACTATCCAAGAATGAAGATAAATATAAAGCGATTCAATCCTTATTCAATGAAAAAAAAGCTTCGCTTAT ACAATTATGTGAAATCGCTAAAGTAAATCGTTCTGGATACTATAAATGGCTCAATCGAGATAAAAGTAATTTAGAACTTG AAAACATTAAATTAGCAACTTTGATAACTAAGATATATGAAGAAAAGAAGGGAGTTTTTGGCTCTTTAAGGATGACCTTG CAGTTAAACAGAGAGTATAAACTTAATGTCAATCACAAGAGAGTGTACAGACTAATGAGAGCCGTAGGCTTAAGGTCTAT TTGTAGAAAAAAGAAATTTAGTTATGTTAAATGTACACCAGAAGTAATTGCTGAAAATGTATTAAATAGAAAATTTAGTG CAGATAAAACTTCTCAAAAATGGTTAACAGATGTAACTGAATTTAAATTAACCAACGGGACAAAGGCTTATTTAAGTGCA ATTCTGGATTTAGGTGATAGAAGCATAGTTTCATATGTTATTGGAAAATCAAATAACAATAACTTAGTATTCGAAACTTT TAATAAAGCAATAGAAGTATATCCAAATGCAAAACCTATCTTTCATAGTGATAGAGGCTATCAGTATACTAGCAGGGTGT TTAAATCAAAACTTTTAACACAAGGCATGATACAAAGTATGTCGAGAGTTGGTCATTGTATTGACAATGCTCCTATGGAA GGATTTTGGGGAATTTTAAAAGTGGAAATGTACTATTTAAGGAAATTTGATACATACGAACAATTAGTCAAAGCAATAGA TGATTATATATATTACTATAATAATTTTAGATATCAAAAGAGATTAAATTCTATGTCTCCACTTGAATTTAGGAAATATT TAAGTACAGAGATAGCATAA Protein sequence : MVITLSKNEDKYKAIQSLFNEKKASLIQLCEIAKVNRSGYYKWLNRDKSNLELENIKLATLITKIYEEKKGVFGSLRMTL QLNREYKLNVNHKRVYRLMRAVGLRSICRKKKFSYVKCTPEVIAENVLNRKFSADKTSQKWLTDVTEFKLTNGTKAYLSA ILDLGDRSIVSYVIGKSNNNNLVFETFNKAIEVYPNAKPIFHSDRGYQYTSRVFKSKLLTQGMIQSMSRVGHCIDNAPME GFWGILKVEMYYLRKFDTYEQLVKAIDDYIYYYNNFRYQKRLNSMSPLEFRKYLSTEIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00737 | YP_008394261.1 | ISEnfa3, transposase | Not tested | Not named | Protein | 2e-35 | 41 |
