Gene Information

Name : pcoR (Ctu_3p00510)
Accession : YP_003212795.1
Strain :
Genome accession: NC_013285
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein pcoR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 32000 - 32695 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence : 
ATCAGCGAGTTGACCATGCAGCGTATTTTAATCGTTGAAGACGAACAAAAAACAGGTCGTTACCTGCAGCAGGGACTGGT
TGAGGAAGGCTATCAGGCCGATCTCTTTAATAATGGCCGCGATGGTCTCGGGGCCGCGTCGAAGGGACAGTATGATTTGA
TAATACTGGACGTGATGCTGCCTTTCCTCGACGGGTGGCAAATCATCAGCGCACTGAGGGAGTCCGGGCACGAAGAACCG
GTCCTGTTTTTAACCGCAAAGGACAACGTGCGGGACAAAGTGAAAGGACTGGAGCTTGGCGCAGATGACTACCTGATTAA
GCCCTTTGATTTTACGGAGCTGGTTGCACGTGTAAGAACCCTACTGCGCCGGGCACGCTCGCAGGCCGCAACAGTCTGCA
CCATCGCCGATATGACCGTTGATATGGTGCGCCGGACCGTGATCCGTTCGGGGAAGAAGATCCATCTCACCGGTAAAGAA
TACGTTCTGCTTGAGTTGCTGCTGCAACGCACCGGAGAAGTGTTACCCAGGAGTCTTATCTCGTCCCTGGTCTGGAACAT
GAATTTTGACAGTGATACGAATGTGATTGATGTCGCCGTGAGACGTCTGAGAAGTAAAATTGATGATGACTTTGAGCCAA
AACTGATCCATACCGTTCGCGGTGCCGGATATGTCCTGGAGATCAGAGAAGAGTGA

Protein sequence : 
MSELTMQRILIVEDEQKTGRYLQQGLVEEGYQADLFNNGRDGLGAASKGQYDLIILDVMLPFLDGWQIISALRESGHEEP
VLFLTAKDNVRDKVKGLELGADDYLIKPFDFTELVARVRTLLRRARSQAATVCTIADMTVDMVRRTVIRSGKKIHLTGKE
YVLLELLLQRTGEVLPRSLISSLVWNMNFDSDTNVIDVAVRRLRSKIDDDFEPKLIHTVRGAGYVLEIREE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-49 55
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-49 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR BAC0308 Protein 7e-96 100
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR BAC0638 Protein 1e-55 64
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR BAC0197 Protein 7e-60 63
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR BAC0083 Protein 3e-59 62
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR BAC0111 Protein 6e-57 60
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR BAC0125 Protein 4e-55 58
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR BAC0347 Protein 1e-49 55
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR NC_007793.3914065.p0 Protein 2e-30 44
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR NC_002758.1121390.p0 Protein 2e-30 44
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR NC_010079.5776364.p0 Protein 2e-30 44
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR NC_002952.2859858.p0 Protein 2e-30 44
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR NC_007622.3794948.p0 Protein 2e-30 44
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR NC_003923.1003417.p0 Protein 2e-30 44
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR NC_013450.8614146.p0 Protein 2e-30 44
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR NC_002951.3238224.p0 Protein 2e-30 44
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR AE015929.1.gene1106. Protein 2e-25 42
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR HE999704.1.gene1528. Protein 2e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR VFG0596 Protein 5e-50 55
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR VFG1390 Protein 5e-35 44
pcoR YP_003212795.1 Transcriptional regulatory protein pcoR VFG1389 Protein 2e-29 42