Gene Information

Name : iucD (Ctu_1p01070)
Accession : YP_003212683.1
Strain :
Genome accession: NC_013283
Putative virulence/resistance : Virulence
Product : L-lysine 6-monooxygenase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG3486
EC number : 1.14.13.59
Position : 103196 - 104521 bp
Length : 1326 bp
Strand : +
Note : -

DNA sequence :
ATCATGAAAACGTACGATTTCATCGGCATTGGCATCGGCCCGTTTAATCTCAGCATCGCCGCGCTCGCCGAAGGGCTTGA
CGGCTTCAGCTCGCTGTTCCTTGAACGCAAACCGCATTTCTCCTGGCATCCGGGCATGATGGTGCCGGACTGCCACATGC
AGACCAGTTTCCTGAAAGATCTGGTCAGCGCGGTGGAGCCAACTAACCGCTACAGTTTTCTGAACTACCTGGTGCAGCGT
AAAAAGTTCTACCGCTTCCTGACCACCGAGCAGCGCACGGTATCCCGTGAAGAGTTTGCCGATTACCTCTGCTGGGCGGC
GGACAACCTGAGCAATCTGTCGTTCAGCCAGCAGGTGCAGCAGGTGAGCTTTAACGAGGCCAGCGGGCTGTTTGAAGTGG
TGACCCAGCGCGATCGCTTCTTCGCGCGCCACGTCTGCATGGGCATCGGCAAGCAGGTCAACCTGCCCGATTGCGTGCCT
GCGCAAAACGACCAATGCTTCCACGCCAGCGAAATGATGCTGCGCACGCCGTCGCTTGCCGGGAAGCGCGTTACGGTCGT
CGGCGGGGGCCAGAGCGGCGCCGATCTGTTTTTAAATATTTTCCGCGGCGAGTGGGGCCAGCCCGCGGCGCTGAACTGGG
TGTCGCGCCGCAACAATTACAACGCGCTCGATGAAGCCGCGTTCGCGAACGAGTATTTCACGCCGGAATATCTGGAGAGC
TTCGCCCGGCTTGATGAGAAAACGCGTTGCGACCTGCTCGCGGAGCAGAAGATGACATCGGACGGCGTCACCTGCGAATC
GCTGCTCGCTATCTACCGCGCCATGTACCACCGCTTTGAGGTGCTGGGTGAAAAACCCTGGGCGCATCTGCTGCCGTCGC
GCTCGGTCACCCGCGTAACGCCACAGGCGCAGGGCCAGCGTCTGTCGCTGCGTCATCATCTGGACGGCGGTCAGGAAACC
CTCGAAGCCGATGTGGTGATTTTCGCGACCGGCTATCGCCCTGCCCGACCGGCATTTCTCGCGCCGCTGGCGCATCGTCT
GCAACTGGATGAGCGCGAAGGCTTCCGGGTTAATACCAACTTTACGCTGGAGTGGGACGGCCCCGACGCGAGTCACCTTT
TTGCCGTGAATGCCGGTATGCACAGCCTCGGCATTGCGGAACCCCAGCTCAGCCTGATGGCCTGGCGGGCCGCGCGCATT
CTCAATGTGGCGCACCCTGACGAGCCGTTTGACCTGAGCACCACGCCTGGCGTGATCCAGTGGCTTTCCCGGCCAGACAC
GGTCACCCGCCAGATTACTCAACCTGTAAACAGCACTGACTACTAA

Protein sequence :
MMKTYDFIGIGIGPFNLSIAALAEGLDGFSSLFLERKPHFSWHPGMMVPDCHMQTSFLKDLVSAVEPTNRYSFLNYLVQR
KKFYRFLTTEQRTVSREEFADYLCWAADNLSNLSFSQQVQQVSFNEASGLFEVVTQRDRFFARHVCMGIGKQVNLPDCVP
AQNDQCFHASEMMLRTPSLAGKRVTVVGGGQSGADLFLNIFRGEWGQPAALNWVSRRNNYNALDEAAFANEYFTPEYLES
FARLDEKTRCDLLAEQKMTSDGVTCESLLAIYRAMYHRFEVLGEKPWAHLLPSRSVTRVTPQAQGQRLSLRHHLDGGQET
LEADVVIFATGYRPARPAFLAPLAHRLQLDEREGFRVNTNFTLEWDGPDASHLFAVNAGMHSLGIAEPQLSLMAWRAARI
LNVAHPDEPFDLSTTPGVIQWLSRPDTVTRQITQPVNSTDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 1e-124 60
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 1e-124 60
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 1e-124 60
iucD AAK71634.1 IucD Virulence SHI-3 Protein 1e-123 60
iucD AAD44749.1 IucD Virulence SHI-2 Protein 7e-125 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iucD YP_003212683.1 L-lysine 6-monooxygenase VFG0618 Protein 4e-125 60
iucD YP_003212683.1 L-lysine 6-monooxygenase VFG0937 Protein 4e-125 60
iucD YP_003212683.1 L-lysine 6-monooxygenase VFG1084 Protein 7e-124 60