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Name : ldcC (CTU_08150) Accession : YP_003209178.1 Strain : Cronobacter turicensis z3032 Genome accession: NC_013282 Putative virulence/resistance : Virulence Product : lysine decarboxylase LdcC Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.17 Position : 885024 - 887162 bp Length : 2139 bp Strand : + Note : - DNA sequence : GTGAACATCATCGCCATCATGGGGCCGCACGGCGTTTTCTATAAAGACGAGCCGATGAAAGAGTTGCAGGCGGCGCTCCA GCAGCAGGGCTTTCAGCTAATCTGGCCGAAAAACAGTAACGATCTGCTGAAGTTTATCGAGCACAACCCGCGCATCTGCG GCGTCATTTTCGACTGGGATGAGTACAGTCTCGATTTGTGCTGTGAAATCAATCAGCTCAACGAGTATTTGCCGCTCTAT GCGTTTATCAATACGCACTCTACGCTTGATGTCAGCGCGAATGAGATGCGCATGGCGCTCTGGTTTTTCGAATATTCGCT GGGCATTGCCGACGACATCGCGACGCGCATTCGCCAGTACACCCAGGAGTATCTCGACAACATCACGCCGCCGTTTACTA AAGCGCTGTTCACGTATGTGAAAGAGGGCAAATACACGTTTTGCACGCCGGGCCATATGGGCGGCACGGCGTATCAGAAA AGCCCGGTCGGCTGCCTGTTTTATGATTTTTTCGGTGGCAACACGCTAAAGGCGGATGTCTCGATCTCCGTCACCGAGCT GGGATCGCTGCTCGATCACACCGGACCGCATCTGGAGGCGGAAGAGTATATCGCCCGCACCTTCGGGGCCGAACAGAGTT ATATGGTGACCAACGGCACGTCCACCTCTAATAAGATAATCGGGATGTACGCCGCGCACGCCGGCAGCACGGTACTCATC GATCGCAACTGCCATAAGTCGCTCACGCATCTGCTGATGATGAGCAATATTGTGCCGCTGTGGCTCAAGCCCACTCGCAA CGCGCTCGGCATTCTTGGCGGCATTCCGAAGCGGGAATTTACCCGCGAGTCGATTGCCCAAAAAGTGGCGCAAACCCCGG ACGCCAGCTGGCCGGTTCATGCGGTCATCACCAACTCCACCTATGACGGGTTGCTGTATAACACCAACTGGATCAAACAG ACGCTGGACGTACCCTCGATCCATTTTGATTCCGCCTGGGTGCCCTATACCCATTTTCACCCGATCTACAAAGGCAAGAG CGGCATGAGCGGCGAGCGCGTGCCCGGTAAAGTATTCTTTGAAACCCAGTCGACCCACAAAATGCTGGCGGCGCTGTCGC AGGCGTCGCTGATCCACATTAAAGGCGACTATGACGAAGAGACGTTCAACGAAGCGTACATGATGCACACCACTACCTCG CCGAGCTATCCGCTGGTGGCGTCCATTGAAACCGCCGCGGCGATGCTGCGCGGCAATCCGGGCCGCCGCTTGATCAACCG CTCGGTGGAGCGGGCGCTGCATTTTCGTAAAGAGGTGCAGCGTCTTCGTGAAGAAACCGACAGCTGGTTCTTCGATATCT GGCAGCCGGAGGAGATTGACGAAGCGGACTGCTGGCCCATCACGCCCGGCGATGACTGGCACGGCTTTACCCATGCTGAC CACGATCATATGTATCTCGATCCGGTAAAGGTCACTATTCTGACGCCGGGCATGGACGCGCAGGGCAATATGGAGAAAGA GGGGATCCCTGCGGCTCTCGTGGCGAAATACCTCGACGAACGCGGCGTGGTGGTGGAGAAAACCGGGCCGTACAACTTGT TGTTCCTGTTCAGTATCGGCATCGATAAAACCCGCGCGATGGGCCTGCTGCGCGGGCTGACGGAGTTTAAGCGCGCTTAT GACCTTAATCTGCGGGTGAAAAACATGCTGCCCGATCTCTGGGCGGAAGATCCGGACTTCTACCGCAACATGCGCGTGCA GGAGTTAGCACAGGGGATCCACAAGCTTATCCAGCAGCACGATCTGCCGGATCTGATGCTGCGCGCGTTTGACGTCTTGC CAGAAATGAAAATGACGCCGCATGAAATGTATCAGCAGCAGGTGAAGGGCAATGTGGAAACGGTGGAGATTGAGAAGCTG ATCGGGCGGGTGTCCGCCAATATGATCCTGCCATATCCGCCCGGCGTGCCGCTGGTGATGCCTGGCGAGATGATCACGGA AGATTCGCGCGCAGTACTCGATTTCCTGCTCATGCTCTGCTCCATCGGCAGACACTATCCCGGCTTTGAAACGGATATCC ACGGGGCGAAGTGCGGCGAAGACGGCGTCTATAGGGTACGTGTCCTAAAAAGCGAGTAA Protein sequence : MNIIAIMGPHGVFYKDEPMKELQAALQQQGFQLIWPKNSNDLLKFIEHNPRICGVIFDWDEYSLDLCCEINQLNEYLPLY AFINTHSTLDVSANEMRMALWFFEYSLGIADDIATRIRQYTQEYLDNITPPFTKALFTYVKEGKYTFCTPGHMGGTAYQK SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIIGMYAAHAGSTVLI DRNCHKSLTHLLMMSNIVPLWLKPTRNALGILGGIPKREFTRESIAQKVAQTPDASWPVHAVITNSTYDGLLYNTNWIKQ TLDVPSIHFDSAWVPYTHFHPIYKGKSGMSGERVPGKVFFETQSTHKMLAALSQASLIHIKGDYDEETFNEAYMMHTTTS PSYPLVASIETAAAMLRGNPGRRLINRSVERALHFRKEVQRLREETDSWFFDIWQPEEIDEADCWPITPGDDWHGFTHAD HDHMYLDPVKVTILTPGMDAQGNMEKEGIPAALVAKYLDERGVVVEKTGPYNLLFLFSIGIDKTRAMGLLRGLTEFKRAY DLNLRVKNMLPDLWAEDPDFYRNMRVQELAQGIHKLIQQHDLPDLMLRAFDVLPEMKMTPHEMYQQQVKGNVETVEIEKL IGRVSANMILPYPPGVPLVMPGEMITEDSRAVLDFLLMLCSIGRHYPGFETDIHGAKCGEDGVYRVRVLKSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 70 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ldcC | YP_003209178.1 | lysine decarboxylase LdcC | VFG1670 | Protein | 0.0 | 64 |
