Name : kpsC (CTU_06130) Accession : YP_003208976.1 Strain : Cronobacter turicensis z3032 Genome accession: NC_013282 Putative virulence/resistance : Virulence Product : capsule polysaccharide export protein kpsC Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3563 EC number : - Position : 660693 - 662711 bp Length : 2019 bp Strand : - Note : - DNA sequence : ATGGTAACCGGTATTTTCTCGAAGGGCATCTGGCGCATTCCCGGCTTAGCGCATCTGCTGCCAATGCCTTGCCGGAAACT CACGCCGCGCCGGGCTATCCCGGACGATATTACGGCTATCGCCGTCTGGGGTCATCGCCCCAGCGCGGCGGCGGCCGAGG CTCGCGCCCGTCAGGCCGGGCGTGCGGTTATCCGTCTGGAAGATGGCTTTATCCGTTCTGCCGGTCCGGCGGTACATGGT CATCCGCCGCTTTCACTGGTTATCGATTACGATGGCATCTACTACGACGCCAGTAAGCAAAGCACGCTGGAGAAACTGAT TCAGGATCGGCCCGGCAACGACGCGCACTGTGAGGCGGCGCAGGAGGCGATGCGGCTTATCGTGCAGGGTGATCTGGCGA AGTATAACCACGCGCCGCCCTTTGACGGCGCGCCAGAGACCCGCGCGGTGCTGGTGGTGGATCAGACCGCAGGCGATATG TCGGTCACGCTCGGCAATGCCAGCGCAGCCTCGTTCCGCCTGATGCTGGAGGTTGCCTGCGCCGAAAACCCTGGCGCCGA AATATGGGTAAAAACACATCCTGACGTCGTGAGCGGCCATAAGCGCGGCTATCTGCGCGACATGTGCGCGGATGGCCGCG TCCGACAGATAGCCCAGGATGCCAGCCCGCAGTCGCTGCTGCGGTGCGTGGAGCGCGTCTACACCGTGACGTCGCACTAC GGCTTTGAAGCGCTGATGGCGGGCAAACCGGTGGTCTGCTTCGGCCAGCCCTGGTATGCCGGATGGGGGCTGACGGACGA CAGGCACCCGGCCGCGGCAACGCTTGCCGCACGGCGCGGCAAGGCCACGTTACTCACACTTTTCAGCGCCGCCTATTTAC GCTACGCACGCTACCTCAATCCGCAAACCGGCGAGCCCGGCACGCTGTTTGATGTGCTGTCGTGGCTGACGTTGCAGCGC CGTCATCAACTGGCGCTGCGCGGTACGCTCTGGACGCCAGGGCTGACGCTCTGGAAACGCAGTATCGTGAAACCGTTTCT CGCCACGCCCTATAACCGGCTGCGCTTTATGCGCCGCGTGCCGCAGGCCGACGCCTGCGTGGTCTGGGGAACGGCAGGTG AAGCCCGCTGGCAGGTGGCGGCGCAGGCGCATGGTCTGCCCGTATGGCGAATGGAGGATGCGTTTCTGCGTTCGGCGGGT CTCGGCTCCGATCTCTTTGCCCCGCTTTCACTGGTGCTGGATAAACGCGGCCTCTATTACGACGCCACGCGCGCAAGCGA TCTGGAAGTCGCCCTTAGCGAGGCGCATCTGACGCCCGCGCAGGAGATGCGCGCCGAACGCCTGCGTCAGCAAATAATCG AAAACGGCGTCAGTAAATACAATGCCGGCGGCGCATGGCGGCTGCCGTCATCGGCATGGGGCCGCCGCGTTCTGCTGGTG CCGGGCCAGGTGAGCGATGACGCTTCGCTGGCCGGCGGTACGAAGGATATCCGCACGCTCACGGCCTTGCTGCGTCTCGT TCGCGCCCGAAACCCGCGGGCGTATATCGTTTTCAAAGCGCACCCGGATGTGGCCGCCGGTAACCGATCGGGCGAGCCCA GTGAACAAGACGCGCTGCGCTGGGCCGATTGCCTCGCGACACAGGCGGATATCGCCGGAGTGCTCGAACAGGTCGACGAG GTGCATACGCTCACCTCGCTGACCGGCTTTGAGGCGCTGCTGCGAGGTAAAACAGTTTACTGCTACGGCATGCCGTTCTA TGCCGGATGGGGACTGACGCACGATGAATATACCTGTCCGCGCCGCACCCGGCGGCTCACGCTTAACGCGCTTATCCACG CGACGCTTATCGATTATCCCTTCTACCTGCACCCGACGCGTAAAACGCCGATGAGCGCCGAAGAGGCCGTCGCACGCCTC AGCGTGTCGCCTGCGCGACGCCGCGCGCTACAGCGCCGCCGGAAAACGCTTATGCGTCTGGCCAATAAAGCCCGCAATCT CTTTCACGCTCTTTTTTAA Protein sequence : MVTGIFSKGIWRIPGLAHLLPMPCRKLTPRRAIPDDITAIAVWGHRPSAAAAEARARQAGRAVIRLEDGFIRSAGPAVHG HPPLSLVIDYDGIYYDASKQSTLEKLIQDRPGNDAHCEAAQEAMRLIVQGDLAKYNHAPPFDGAPETRAVLVVDQTAGDM SVTLGNASAASFRLMLEVACAENPGAEIWVKTHPDVVSGHKRGYLRDMCADGRVRQIAQDASPQSLLRCVERVYTVTSHY GFEALMAGKPVVCFGQPWYAGWGLTDDRHPAAATLAARRGKATLLTLFSAAYLRYARYLNPQTGEPGTLFDVLSWLTLQR RHQLALRGTLWTPGLTLWKRSIVKPFLATPYNRLRFMRRVPQADACVVWGTAGEARWQVAAQAHGLPVWRMEDAFLRSAG LGSDLFAPLSLVLDKRGLYYDATRASDLEVALSEAHLTPAQEMRAERLRQQIIENGVSKYNAGGAWRLPSSAWGRRVLLV PGQVSDDASLAGGTKDIRTLTALLRLVRARNPRAYIVFKAHPDVAAGNRSGEPSEQDALRWADCLATQADIAGVLEQVDE VHTLTSLTGFEALLRGKTVYCYGMPFYAGWGLTHDEYTCPRRTRRLTLNALIHATLIDYPFYLHPTRKTPMSAEEAVARL SVSPARRRALQRRRKTLMRLANKARNLFHALF |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 1e-177 | 62 |
kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 2e-177 | 62 |
lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 3e-124 | 47 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
kpsC | YP_003208976.1 | capsule polysaccharide export protein kpsC | VFG0259 | Protein | 1e-124 | 47 |
kpsC | YP_003208976.1 | capsule polysaccharide export protein kpsC | VFG0704 | Protein | 3e-104 | 45 |
kpsC | YP_003208976.1 | capsule polysaccharide export protein kpsC | VFG0692 | Protein | 2e-114 | 44 |
kpsC | YP_003208976.1 | capsule polysaccharide export protein kpsC | VFG2568 | Protein | 4e-70 | 41 |