Gene Information

Name : kpsS (CTU_06120)
Accession : YP_003208975.1
Strain : Cronobacter turicensis z3032
Genome accession: NC_013282
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export protein kpsS
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3562
EC number : -
Position : 659481 - 660677 bp
Length : 1197 bp
Strand : -
Note : -

DNA sequence : 
ATGAACCGCAGCGCCCTTGATACTCTGCTTTCCGGCCAGAAATACCTGCTTTTGCAAGGGCCGATGGGGCCGTTTTTTCG
TGACCTCGGCAACTGGCTGGAAAGCAAAGGCCGCGAGGCCAGACAGGTTATTTTCAACGGAGGCGATCGGTTTTACTGCC
GCAAGGAGAAAAGCTTGCCGTATCAAGGCACGCCGGAGGGTTTTGGCGCGTGGCTTGCCGCAACGCGAAGCACGTGGTCA
TTTGATACGCTGGTCTGCTTCGGCGACTGCCGACCGCTACACCAGGCCGCCCGCCGCTGGGCGCAAACGCTGGGGATTCG
TTTTCTGGTTTTTGAAGAGGGCTATTTGCGCCCGTGTTTTATCACGCTTGAAGAGAATGGGGTGAATGGGTTTTCCGGGC
TGCCGCGGGAGGCAGGGTTTTATCGTACTCTGCCTTTTCTGCCAGTCCCTGATGTGCGACGCATCGCCCCTTCGCTCCTC
AGGCGTATTAGTCACGCGGCCTGGTATTATCTGATGGGCTGTTATCATCGCCGTGCGTTTCCGGGCTACCAGCACCACAA
ATGTTTCTCGCCCTGGTATGAAGGCGCCTGCTGGACGCGCGCCGCCCTACGGAAGATCTGGTATCGCTGTACGGAGCGCC
GCATACGACGTTCACTGGCCTCGCAGTATCGCGGACGATACTTTCTCGCCCTGCTACAGGTTTTTAACGACAGCCAGCTA
CGGCACCACAGCGATTACGGCGATATGTGTGATTTTATTGAGGAGACGATCGGCTCATTTGCACGCGGAGCTTTAGCCTC
GCGAATGCTGGTCATCAAGCACCATCCGATGGACAGAGGGCACCGGCTTTACCGTTCGCTGATTAACGCCCTGTGCAAGC
GCTATGGCGTGAGCGGGCGAGTGGTTTATGTGCACGATCTGCCTTTACCAGAGTTGCTGAGCAATGCGGCAGGCGTCGTG
ACCATCAACAGTACGGCGGGGATCTCAGCGCTCATTCACAATAAACCCCTGAAGGTAATGGGAAAGGCGCTGTATGATAT
GGAAGGGTTAACGTTTCAGGGGCCTCTGGATGCGTTCTGGAAAACGCCCTTTCGACCCGATCACCAGTTGTTTTCCACGT
TTCGCTATTATCTGATGCATAAAACGCAGCTTAATATGGTGTTTTACAGCCGTGAAAACCCGTTCGTCGGGTTATAA

Protein sequence : 
MNRSALDTLLSGQKYLLLQGPMGPFFRDLGNWLESKGREARQVIFNGGDRFYCRKEKSLPYQGTPEGFGAWLAATRSTWS
FDTLVCFGDCRPLHQAARRWAQTLGIRFLVFEEGYLRPCFITLEENGVNGFSGLPREAGFYRTLPFLPVPDVRRIAPSLL
RRISHAAWYYLMGCYHRRAFPGYQHHKCFSPWYEGACWTRAALRKIWYRCTERRIRRSLASQYRGRYFLALLQVFNDSQL
RHHSDYGDMCDFIEETIGSFARGALASRMLVIKHHPMDRGHRLYRSLINALCKRYGVSGRVVYVHDLPLPELLSNAAGVV
TINSTAGISALIHNKPLKVMGKALYDMEGLTFQGPLDAFWKTPFRPDHQLFSTFRYYLMHKTQLNMVFYSRENPFVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsS YP_854344.1 polysialic acid capsule synthesis protein KpsS Not tested PAI I APEC-O1 Protein 2e-121 62
kpsS AAZ04471.1 capsule polysaccharide export protein Virulence PAI I APEC-O1 Protein 2e-121 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsS YP_003208975.1 capsule polysaccharide export protein kpsS VFG0693 Protein 3e-68 42
kpsS YP_003208975.1 capsule polysaccharide export protein kpsS VFG0705 Protein 3e-68 42