Gene Information

Name : kpsT (CTU_06080)
Accession : YP_003208971.1
Strain : Cronobacter turicensis z3032
Genome accession: NC_013282
Putative virulence/resistance : Virulence
Product : Polysialic acid transport ATP-binding protein kpsT
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : 3.6.3.38
Position : 652638 - 653303 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
ATGATCGCTATCGAAAATCTCACTAAATCGTACCGCACGCCGGCTGGGCGGCATTATGTCTTTAAGGATCTCAATCTGAC
GCTGCCGTCTGGTAAGAGCATCGCGCTGATTGGCCGTAACGGGGCGGGGAAATCCACGCTGCTGCGCATGATTGGCGGCA
CGGATAACCCGGACCATGGGCGAATCGTCTCCAGCGCGTCGATCTCCTGGCCGGTCGGGCTGGCGGGTGGTTTTCAGGGC
AGCCTCACCGGGCGCGAAAATGTGAAATTCGTGGCGCGGCTATACGCCGCTAAAGACGAAGTGCGGCAAAAAGTCGCGTT
CGTGGAGGAATTCGCCGAGCTCGGAAAATATTTTGATATGCCGGTGAAAGCCTACTCTTCCGGTATGAAAGCGCGTCTCG
GGTTCGGGCTGAGCATGGCTTTCCGGTTTGATTACTATCTGGTGGACGAAGTGACCGCTGTGGGCGACGCGAGCTTTCGT
AAAAAATGCGAAACGCTGTTCGAGGAGCGCTACCGCGAATCCTGTTTTTTAATGGTGTCGCATAATCTCAATTCGCTAAA
ACAGTACTGCGATGCGGCGGTGTTTATAGGCCGGGAAAATCACGTGCATTTTTACGACAGCGTTGATGATGCCATTGACG
CGTATAAAGCTCAGGAGAACCTGTAA

Protein sequence : 
MIAIENLTKSYRTPAGRHYVFKDLNLTLPSGKSIALIGRNGAGKSTLLRMIGGTDNPDHGRIVSSASISWPVGLAGGFQG
SLTGRENVKFVARLYAAKDEVRQKVAFVEEFAELGKYFDMPVKAYSSGMKARLGFGLSMAFRFDYYLVDEVTAVGDASFR
KKCETLFEERYRESCFLMVSHNLNSLKQYCDAAVFIGRENHVHFYDSVDDAIDAYKAQENL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 9e-74 70
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-74 67
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 4e-45 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT YP_003208971.1 Polysialic acid transport ATP-binding protein kpsT VFG1449 Protein 7e-75 67
kpsT YP_003208971.1 Polysialic acid transport ATP-binding protein kpsT VFG0696 Protein 8e-46 46
kpsT YP_003208971.1 Polysialic acid transport ATP-binding protein kpsT VFG0258 Protein 2e-45 46
kpsT YP_003208971.1 Polysialic acid transport ATP-binding protein kpsT VFG2563 Protein 2e-41 41