Gene Information

Name : yjcC (CTU_37470)
Accession : YP_003212110.1
Strain : Cronobacter turicensis z3032
Genome accession: NC_013282
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4943
EC number : -
Position : 3899138 - 3900748 bp
Length : 1611 bp
Strand : -
Note : -

DNA sequence :
ATAATGAATTTCAGGGCACGACGTCAGGCGTTGCGAATCTCAGGCATAATCATGGTGGTCTTACTGCCTGTGATGCTTGC
GCTTTGGATCGCCCATCACCGGGCGGTCAATGAGACGCGTGCACATCTGGATACCTTCGCGCAACTGGTTCTCAACCGTA
CCGAACTGGTGTTAAGCCACGTCGAAGAAACCCGTAACGAAGCCGAAAAATATCAGGGCGAAATATGCTCTTCGGCGCAT
CAACGAAATATGCTGGATATTTCTCGCGGACAAATATTCATCGAAGATTTAATTTACGCGCAAGGCGACGAGTTATTATG
TTCGACCCTGTTCGATCAGCCTTTTATTCTGTCTCCCGCTAATTATACCCGCACGCCAGATGTTGCTTATTATTATTATC
GTGATACGCCGTTCTTTTCCGGCCATAAGATGATTTATTTGCGTAAGGGAAATTATGTCGCTGTGGTTAACCCACTTTCC
TTTAGCGAAATATTATCCAGTGACGCCACCATTTCTTATGGCGTGTATGACACCGTTACCCGGGAATTCTTTTCGGTAAG
TGAAAAAGCCGACGCCCGCGCGTTTGCGCCTTTTGCGCGTTCGCAAAACGCCGATTTCCAGAAGGATGGTCGTTTCTGGT
CAATCGTGCTGTCCGGTAAGCGCCCGATTGCCGTTGCCGTCTCAACAAGCGACGCCTGGTTCTGGCAGGCGTGGCGCCGT
CAGATGTCAGTTATGCTGCCGCTCGGGCTTATCATGGGCGGTTTGCTGGTTTTTCTCGGCTCGCGTACCCGCAACCGTTT
CAACTCGCCAGGCCGCCAGCTCCAGCGCGCGTTGCAAAAACGAGCGCTGCGCCTGCATTATCAGCCGATTATGGATATCA
AACACGGCATGTGCGTCGGGGCCGAGGCGCTGCTGCGCTGGCCTGGCTATAACGGTCAGGTGATGAGCCCGGCGGAGTTT
ATCCCGCTTGCGGAAAAAACCGGGATGATCGCGCAGGTGACTGATTATGTGGTAGAAGAGTTGTTTAATGACTTAGGCCA
TTTCCTGGCGACCCACCCGCAAATTTATATTTCCATTAACCTTTCCGCCTCGGATTTCCATTCGTCGCGCCTGATTGCGT
TAATCGAAGGGAAAAATAGCCAGCACGGGGTGCGGGCGCAGCAAATCAAGATTGAAGTGACCGAACGGGGCTTTATTGAC
GTGCCGCGCACCACGCCGGTTATTCAGGCGTTTCGCCAGTCGGGCTTTGAGATTGCTATCGACGATTTCGGCACCGGATA
TTCCAATCTTCATAATCTCTATTCGCTGAATGTCGATATTCTGAAAATTGATAAATCGTTTATTGATACCTTAACCACGA
ACAGCACCAGCCATTTGATTGCGGAGCATATTATCGATATGGCCCAGAGTCTGCGGCTGAAAATTATCGCCGAGGGCGTG
GAAACCGCCGAACAGGTGGGCTGGTTGTTAAAGCGTGGCGTGCAGTATTGCCAGGGCTGGCATTTCTCAAAAGCGCTGCC
GCGTCAGGAGTTTGTCGCCTGGCTGCAACAGGATGACGCCCGGGGAATACCGGGCTGGCAGAGCTGCACCGTTAATCGTC
AGGCGCTCTGA

Protein sequence :
MMNFRARRQALRISGIIMVVLLPVMLALWIAHHRAVNETRAHLDTFAQLVLNRTELVLSHVEETRNEAEKYQGEICSSAH
QRNMLDISRGQIFIEDLIYAQGDELLCSTLFDQPFILSPANYTRTPDVAYYYYRDTPFFSGHKMIYLRKGNYVAVVNPLS
FSEILSSDATISYGVYDTVTREFFSVSEKADARAFAPFARSQNADFQKDGRFWSIVLSGKRPIAVAVSTSDAWFWQAWRR
QMSVMLPLGLIMGGLLVFLGSRTRNRFNSPGRQLQRALQKRALRLHYQPIMDIKHGMCVGAEALLRWPGYNGQVMSPAEF
IPLAEKTGMIAQVTDYVVEELFNDLGHFLATHPQIYISINLSASDFHSSRLIALIEGKNSQHGVRAQQIKIEVTERGFID
VPRTTPVIQAFRQSGFEIAIDDFGTGYSNLHNLYSLNVDILKIDKSFIDTLTTNSTSHLIAEHIIDMAQSLRLKIIAEGV
ETAEQVGWLLKRGVQYCQGWHFSKALPRQEFVAWLQQDDARGIPGWQSCTVNRQAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yjcC YP_219130.1 diguanylate cyclase/phosphodiesterase Not tested SPI-4 Protein 7e-162 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yjcC YP_003212110.1 hypothetical protein VFG0584 Protein 3e-162 64