Gene Information

Name : xerD (CTU_34420)
Accession : YP_003211805.1
Strain : Cronobacter turicensis z3032
Genome accession: NC_013282
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3589525 - 3590421 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence :
GTGGAACAGGATTTAGCCCGTATCGAACAATTTCTCGATGCGCTCTGGCTTGAGCGCAACCTGGCCGAGAACAGCCTGAG
CGCGTACCGGCGGGATCTCAGCATGGTCGTGGAGTGGTTGCACCATCGCGGGTTGTCCCTTGCGACGGTACAGAGTGGCG
ACCTCCAGACGTTGCTCGCAGAGCGCGTCGAGGGCGGCTACAAAGCGACCAGCACCGCACGAATGCTCAGCGCCGTGCGT
CGGTTGTTTCAGCATCTCTACCGTGAAAAAATTCGCGATGACGATCCGAGCGCGCTGCTGGCGTCGCCAAAGTTGCCGCA
GCGTTTGCCGAAGGATTTAAGCGAGGCTCAGGTAGACAGGCTCCTGCAGGCGCCGACGGTTGAAGAGCCTATCGAACTGC
GCGATAAAGCCATGCTGGAAGTGCTGTACGCCACCGGGTTGCGCGTTTCTGAGCTGGTTGGGTTGACCATGAGCGACGTG
AGCCTGCGACAGGGCGTGGTACGCGTTATCGGTAAGGGCAATAAAGAGCGGCTGGTGCCGCTTGGCGAAGAGGCCGTTTA
CTGGGTTGAGCAATACCTGACGCACGGCCGCCCATGGCTGCTTAACGGGCAGTCGCTGGATATCCTCTTTCCGAGCAACC
GCGCCCGACAAATGACCCGTCAGACCTTCTGGCATCGCATCAAACATTATGCTCAACTGGCGGGCATCGATAGTGAAAAG
CTTTCGCCGCACGTTTTACGCCATGCGTTCGCCACGCATCTGTTAAATCATGGCGCCGATTTGCGCGTGGTACAGATGCT
CTTAGGCCATAGCGATCTTTCCACCACGCAGATCTACACTCACGTGGCGACGGAACGGTTGCGGCAACTTCATCAACAGC
ACCACCCCAGAGCGTGA

Protein sequence :
MEQDLARIEQFLDALWLERNLAENSLSAYRRDLSMVVEWLHHRGLSLATVQSGDLQTLLAERVEGGYKATSTARMLSAVR
RLFQHLYREKIRDDDPSALLASPKLPQRLPKDLSEAQVDRLLQAPTVEEPIELRDKAMLEVLYATGLRVSELVGLTMSDV
SLRQGVVRVIGKGNKERLVPLGEEAVYWVEQYLTHGRPWLLNGQSLDILFPSNRARQMTRQTFWHRIKHYAQLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-61 52
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-61 52