Name : ramA (CTU_29250) Accession : YP_003211288.1 Strain : Cronobacter turicensis z3032 Genome accession: NC_013282 Putative virulence/resistance : Resistance Product : transcriptional activator ramA Function : - COG functional category : K : Transcription COG ID : COG2207 EC number : - Position : 3060210 - 3060554 bp Length : 345 bp Strand : - Note : - DNA sequence : ATGGAACTTCCCGCTCAGGTTATTGAAACGCTGACTGACTGGATTGATGACAATCTTCACAAGCCGTTGCGCATTGATGA TATTGCGCGCCACGCGGGCTATTCCAAATGGCATTTGCAACGGCTTTTCCATCACCACAAAGGGGAGAGCATCGGGCGCT ACATCCGGGAGAAAAAGCTGCGTCTGGCGGCGCAGGATCTGCGCGCTACTAACGATCGCGTGCTGGATATCTCAATGAAA TATGGGTTTGACTCCCAGCAAACTTTTACGCGCCTGTTCACGCGTAAATTTCAGATGTCGCCGGGCACGTGGCGCAAGCA GGGCGACGCGCCGACGAACCACTGA Protein sequence : MELPAQVIETLTDWIDDNLHKPLRIDDIARHAGYSKWHLQRLFHHHKGESIGRYIREKKLRLAAQDLRATNDRVLDISMK YGFDSQQTFTRLFTRKFQMSPGTWRKQGDAPTNH |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
soxS | YP_219131.1 | DNA-binding transcriptional regulator SoxS | Not tested | SPI-4 | Protein | 4e-23 | 47 |
tetD | AAL08447.1 | putative transcriptional regulator TetD | Not tested | SRL | Protein | 4e-20 | 43 |
tetD | AEA34665.1 | tetracycline resistance protein D | Not tested | Not named | Protein | 4e-20 | 43 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
ramA | YP_003211288.1 | transcriptional activator ramA | CP001138.1.gene612.p | Protein | 1e-37 | 68 |
ramA | YP_003211288.1 | transcriptional activator ramA | CP001918.1.gene327.p | Protein | 3e-24 | 49 |
ramA | YP_003211288.1 | transcriptional activator ramA | CP000647.1.gene4499. | Protein | 4e-24 | 47 |
ramA | YP_003211288.1 | transcriptional activator ramA | CP001138.1.gene4488. | Protein | 1e-23 | 47 |
ramA | YP_003211288.1 | transcriptional activator ramA | CP001918.1.gene2033. | Protein | 9e-22 | 46 |
ramA | YP_003211288.1 | transcriptional activator ramA | BAC0371 | Protein | 1e-22 | 45 |
ramA | YP_003211288.1 | transcriptional activator ramA | NC_002695.1.914293.p | Protein | 1e-22 | 45 |
ramA | YP_003211288.1 | transcriptional activator ramA | CP000647.1.gene1624. | Protein | 2e-21 | 45 |
ramA | YP_003211288.1 | transcriptional activator ramA | NC_002695.1.917339.p | Protein | 1e-21 | 45 |
ramA | YP_003211288.1 | transcriptional activator ramA | CP001138.1.gene1637. | Protein | 1e-21 | 45 |
ramA | YP_003211288.1 | transcriptional activator ramA | BAC0560 | Protein | 1e-21 | 45 |
ramA | YP_003211288.1 | transcriptional activator ramA | CP000034.1.gene1596. | Protein | 1e-21 | 45 |
ramA | YP_003211288.1 | transcriptional activator ramA | CP000034.1.gene4505. | Protein | 2e-22 | 44 |
ramA | YP_003211288.1 | transcriptional activator ramA | NC_010558.1.6276025. | Protein | 2e-20 | 43 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
ramA | YP_003211288.1 | transcriptional activator ramA | VFG0585 | Protein | 1e-23 | 47 |
ramA | YP_003211288.1 | transcriptional activator ramA | VFG1038 | Protein | 2e-20 | 43 |