Gene Information

Name : emrE (CTU_20480)
Accession : YP_003210411.1
Strain : Cronobacter turicensis z3032
Genome accession: NC_013282
Putative virulence/resistance : Resistance
Product : Multidrug transporter emrE
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 2150083 - 2150412 bp
Length : 330 bp
Strand : -
Note : -

DNA sequence :
ATGACCTGGCTGCTGCTCTCTGTGGCGATTGTGTGTGAAGTGATTGGGACGACCTTTCTGAAACTTTCCGAAGGCTTCAG
CCGCCTGCTGCCGACGCTGGTGACGGCGGTTTGTTACGGCATTGCCTTCTGGTGTTTAAGCGTCACCATGCGCACCATCC
CGACCGGCATTATTTACGCCATCTGGTCCGGCGTTGGCATCGTGCTGATTGGCGTGGTCGGCTGGATCTTCCTCGGTCAA
AAGCTCGATCTGCCCGCCATGCTCGGCATGGGGCTGATTATCGCAGGCGTCATCGTGATAAACCTCTTTTCCCGCGCGGT
CGCGCATTAA

Protein sequence :
MTWLLLSVAIVCEVIGTTFLKLSEGFSRLLPTLVTAVCYGIAFWCLSVTMRTIPTGIIYAIWSGVGIVLIGVVGWIFLGQ
KLDLPAMLGMGLIIAGVIVINLFSRAVAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 4e-11 53
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 4e-11 53
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 4e-11 53
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 6e-11 53
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 4e-11 53
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 4e-11 53
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-11 53
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 6e-11 53
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 4e-11 53
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 4e-11 53
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-11 53
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 6e-11 53
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 4e-11 53
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 4e-11 53
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-11 53
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 6e-11 53
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 4e-11 53
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 4e-11 53
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-11 53
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 4e-11 53
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 4e-11 53
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 4e-11 53
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 4e-11 53
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 4e-11 53
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 4e-11 53
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 4e-11 53
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 6e-11 53
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 4e-11 53
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 4e-11 53
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 4e-11 53
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 8e-08 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
emrE YP_003210411.1 Multidrug transporter emrE CP001138.1.gene1489. Protein 2e-21 69
emrE YP_003210411.1 Multidrug transporter emrE NC_002695.1.913273.p Protein 1e-16 62
emrE YP_003210411.1 Multidrug transporter emrE BAC0150 Protein 1e-16 61
emrE YP_003210411.1 Multidrug transporter emrE BAC0377 Protein 5e-18 60
emrE YP_003210411.1 Multidrug transporter emrE CP004022.1.gene1549. Protein 6e-15 57
emrE YP_003210411.1 Multidrug transporter emrE NC_010410.6003348.p0 Protein 1e-13 54
emrE YP_003210411.1 Multidrug transporter emrE BAC0002 Protein 1e-13 54
emrE YP_003210411.1 Multidrug transporter emrE BAC0324 Protein 8e-16 53
emrE YP_003210411.1 Multidrug transporter emrE BAC0322 Protein 2e-15 53
emrE YP_003210411.1 Multidrug transporter emrE BAC0323 Protein 2e-11 53
emrE YP_003210411.1 Multidrug transporter emrE BAC0321 Protein 1e-10 44
emrE YP_003210411.1 Multidrug transporter emrE BAC0140 Protein 2e-05 44
emrE YP_003210411.1 Multidrug transporter emrE BAC0192 Protein 4e-07 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
emrE YP_003210411.1 Multidrug transporter emrE VFG1586 Protein 3e-08 41