Gene Information

Name : CTU_19290 (CTU_19290)
Accession : YP_003210292.1
Strain : Cronobacter turicensis z3032
Genome accession: NC_013282
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 2020072 - 2021613 bp
Length : 1542 bp
Strand : +
Note : -

DNA sequence :
ATGCTGATGTCTGTTCAGAATACCCCTTCTTCTGCCGGCGAAACGCAGGTGCTGGAAACCACTGGCGGCGTGTACGCCTC
GCTGTTTGAAAAAATCAACCTGCATCCGGTCGCCGCGCTTGGCGATATCGATACCTGGCAGGACAGCCAGAGCCTGGCGG
ACGCCTCTGCCGATGAGCGCGTGACCGCCGCGGTACAGGTCTTTCTGGAGCGCCTGAAACAGTCTGGCCAGAAAGTCGAA
AAGCTCGATAAAACGCTGCTCGATCACCATATCGCCGATCTGGACTGGCAAATCAGTCGCCAGCTGGATGCGGTGATGCA
CCACAGTGAATTTCAGAAAGTGGAATCGCTGTGGCGCGGTCTGAAGCATCTGGTGGACCGTACCGATTACCGCCAGAACG
TGCGCACCGAAATTCTGGATATTTCCAAAGAAGATCTGCGTCAGGATTTCGAGGATGCCCCGGAAATTGTGCAGAGCGGC
CTCTACTGGCACACCTACACGGCGGAATATGACACGCCCGGCGGCGAGCCGGTGGGGGCGGTGATTTCATCCTATGAATT
CGACGCCAGCGCGCAGGACATGGCCCTGCTGCGCAATATTTCCAAAGTTTCCGCCGCGGCGCACATGCCGTTTATCGGCG
CCGTCGGCCCGACATTCTTCCTGAAAGACACGATGGAAGAGGTGGCGGCCATCAAGGATATCGGCAACTACTTTGATCGC
GCGGAATACATCAAATGGAAATCCTTCCGCGATACCGACGATGCCCGCTATATCGGCCTGACCATGCCGCGTGTGCTGGG
CCGTCTGCCGTATGGCCCGGATACCGTGCCGGTGCGCAGCTTTAACTACGTGGAAGAAGTGAAAGGCCCGGACCATGAGA
AATACCTCTGGACCAACGCCTCGTTCGCCTTCGCCGCCAATATGGTGCGCAGCTTTATTAATAACGGCTGGTGCGTGCAG
ATCCGCGGCCCGCAGGCGGGCGGCGCGGTGCAGGACTTGCCGATCCATCTCTACGATCTTGGCACCGGCAATCAGGTGAA
AATCCCGTCGGAAGTGATGATCCCGGAGACCCGCGAATTTGAATTCGCCAACCTCGGCTTTATTCCGCTCTCGTATTACA
AAAACCGCGATTACGCCTGCTTCTTCTCGGCGAACTCCGCGCAGAAACCGGCGCTGTACGATACCCCGGACGCTACCGCT
AACAGCCGCATCAACGCGCGCCTGCCGTATATCTTCCTGCTGTCGCGTATTGCGCATTACCTGAAGCTTATCCAGCGCGA
AAACATCGGCACCACCAAAGATCGCCGCCTGCTGGAGCTTGAGCTGAATAACTGGGTGCGTGGGCTGGTCACGGAGATGA
CCGATCCGGGCGATGAGCTTCAGGCGTCACACCCGCTGCGCGATGCAAAAGTGGTGGTGGAAGACATCGAAGACAATCCG
GGCTTTTTCCGCGTCAGGCTCTATGCCGTGCCGCATTTCCAGGTGGAAGGCATGGATGTCAACCTGTCGCTGGTGTCGCA
GATGCCGAAAGCGAAAGCCTGA

Protein sequence :
MLMSVQNTPSSAGETQVLETTGGVYASLFEKINLHPVAALGDIDTWQDSQSLADASADERVTAAVQVFLERLKQSGQKVE
KLDKTLLDHHIADLDWQISRQLDAVMHHSEFQKVESLWRGLKHLVDRTDYRQNVRTEILDISKEDLRQDFEDAPEIVQSG
LYWHTYTAEYDTPGGEPVGAVISSYEFDASAQDMALLRNISKVSAAAHMPFIGAVGPTFFLKDTMEEVAAIKDIGNYFDR
AEYIKWKSFRDTDDARYIGLTMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHEKYLWTNASFAFAANMVRSFINNGWCVQ
IRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYACFFSANSAQKPALYDTPDATA
NSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDELQASHPLRDAKVVVEDIEDNP
GFFRVRLYAVPHFQVEGMDVNLSLVSQMPKAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-101 46
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 2e-101 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTU_19290 YP_003210292.1 hypothetical protein VFG2475 Protein 5e-111 47
CTU_19290 YP_003210292.1 hypothetical protein VFG2093 Protein 1e-109 45
CTU_19290 YP_003210292.1 hypothetical protein VFG2070 Protein 2e-86 42