Gene Information

Name : fimB (CTU_01870)
Accession : YP_003208550.1
Strain : Cronobacter turicensis z3032
Genome accession: NC_013282
Putative virulence/resistance : Virulence
Product : chaperone protein fimB/fhaD
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 193891 - 194616 bp
Length : 726 bp
Strand : +
Note : -

DNA sequence : 
CTGTATTTCCTCAAGGGAGTGAATAGCATGGCGAATACCCTTTCCTGGAAGGGCGCTTTCTTTGCGCTGGCGACGTGGTT
CGCCTGTCCGGCGACCATCGCCAGTATCGTGATTACCGGCACCCGCGTGATTTACCCGAGCGACGCGCCGGAAGTCAGCG
TTAAGCTCGATAATAAAGGAACCTCGCCGGTATTAATTCAAAGCTGGATCGATAACGGCAATGCCGATGCCGCGCCAGAA
ACTATCCAGGTGCCATTTATTCTGACGCCGCCCATTAACCGGGTAGAGCCGGATAAAGGCCAGACGCTGCGTATTACTTT
TACCGGTAAATTATTGCCAGCGGATCGTGAATCCGTTTACTGGCTTAACGTGCTGGAAATCCCTGCCAAAAAAGCGTCTA
CGGTCAACGATAACTATTTACAGGTCGCGTTTCGCTCACGCATTAAATTATTTCTTCGACCAAAAGGCCTTGAAGGCAAT
GCCAACCAGGCGGTAACTCAGGTGACCTGGCGGGCGAACGGCCAGACTATCGAGGCGATAAACCCTACGCCTTATTTTAT
CTCCCTGGTCAATCTGAAGGTTAACGGGAAAACCATTAATGCTGACATGATGTCGCCGAAATCCACCATGACGGTAAAAC
TGTCCGGCAGCCCGGGGAATAAACTCGCAGGCGTCTTTGTTAATGATTATGGCGCACTGAATGAATTCGAAGCGACGCTG
AAATAA

Protein sequence : 
MYFLKGVNSMANTLSWKGAFFALATWFACPATIASIVITGTRVIYPSDAPEVSVKLDNKGTSPVLIQSWIDNGNADAAPE
TIQVPFILTPPINRVEPDKGQTLRITFTGKLLPADRESVYWLNVLEIPAKKASTVNDNYLQVAFRSRIKLFLRPKGLEGN
ANQAVTQVTWRANGQTIEAINPTPYFISLVNLKVNGKTINADMMSPKSTMTVKLSGSPGNKLAGVFVNDYGALNEFEATL
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 8e-42 43
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 4e-43 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fimB YP_003208550.1 chaperone protein fimB/fhaD VFG0007 Protein 1e-45 45
fimB YP_003208550.1 chaperone protein fimB/fhaD VFG1468 Protein 5e-42 43
fimB YP_003208550.1 chaperone protein fimB/fhaD VFG1145 Protein 5e-36 43