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Name : topB (CTU_18110) Accession : YP_003210174.1 Strain : Cronobacter turicensis z3032 Genome accession: NC_013282 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 1890231 - 1892177 bp Length : 1947 bp Strand : + Note : - DNA sequence : ATGCGGTTGTTTATTGCCGAAAAGCCCAGCCTGGGGCGCGCCATCGCCGACGTGTTGCCTAAGCCGCACCGCCGGGGCGA CGGGTTTATTGAGTGCGGGAACGGCCAGGTGGTCACCTGGTGCGTCGGGCATCTGCTGGAGCAGGCGCAGCCGGACGCTT ACGACAGCCGCTATGGCCGCTGGAATCTCGCCGACTTACCCATCGTGCCGGAAAAGTGGCAGCTTCAGCCGAAACCGTCG GTCGCAAAGCAGCTCAATGTGATTAAAAAGCTGCTGCGCGAGGCGCAGGAGATAGTGCATGCGGGCGACCCGGATCGCGA AGGGCAACTGCTGGTGGACGAAGTGCTCGACTACCTGCAACTGCCCGCGGAAAAGCGCCAGCAGGTGCGCCGCTGCCTGA TTAACGATCTCAACCCGCAGGCGGTGGAGCGCGCTATCGACAAGCTGCGCGAGAACCGCGAGTTTGTCCCGCTCAGCACC TCGGCGCTCGCCCGCGCCCGCGCCGACTGGCTTTACGGCATTAACATGACGCGCGCCTATACGCTGCTCGGGCAGAACGC GGGCTATCAGGGCGTGCTCTCGGTAGGCCGCGTCCAGACGCCCGTGCTGGGGCTGGTGGTGCGGCGCGACGAAGAGATAG AACACTTCGTCGCCAAAGATTTCTTTGAAGTCAAAGCGCACATCGTTACGCCCGCCCAGGAGCGCTTCACCGCGCTCTGG CAGCCGAGCGAGGCCTGCGAGCCGTATCAGGATGAAGAGGGGCGGCTTCTGAACCGGGCCCTGGCGGAGCATGTCGTTAA GCGTATCGAAGGGCAGCCTGCGCGTGTCACCAGCTACAACGACAAACGCGAAGGCGAAGCCGCGCCGCTGCCGTTCTCGC TCTCGACGCTGCAAATCGAGGCCTCAAAACGCTTTAACCTGAGCGCGCAGGCAGTGCTGGATATCTGCCAGAAGCTGTAC GAAACCCACAAACTCATTACGTATCCGCGCTCCGACTGCCGCTACCTGCCGGAGGAGCACTTCGCGGGCCGCCATGCGGT GCTGAAGGCGATAGGCGTCCATGCGTCGGATCTGCTGCCGCAGCCCGCAGTCGATCCTGAGCGTCGCAACCGCTGCTGGG ACGACAAAAAAGTGGACGCCCACCACGCCATCATCCCGACGGCGCGCAGCGCGCCCGCGTCGCTCTCTGACGGCGAAGCG AAAATCTACGGGCTTATCGCCCGTCAGTACCTGATGCAGTTCTGTCAGGACGCGCAGTTTCGCAAATGCGTCATTGAGCT TGACATCGCGGGCGGCAAATTCATCGCTAAAGCGCGCTTTCTGGCTGAGGCGGGCTGGCGCACGCTGCTCGGCGCGAAAG AGCGCGACGAAGAGAACGACGGCACGCCGCTGCCGGTGGTCGCAAAGGGCGACGAGCTGCATTGCGAACGGGGTGAAGTG GTCGAACGTCAGACCCAACCGCCGCGCCATTTCACCGACGCCACGCTCCTGTCGGCCATGACCGGTATCGCGCGCTTCGT GCAGGATAAAGATCTGAAAAAAATCCTGCGCGCCACCGACGGGCTCGGCACGGAAGCGACCCGCGCAGGGATTATCGAGC TGCTGTTTAAGCGCGGTTTTCTTGAAAAGCAGGGGCGCTATATCCACTCGACGCCCGCCGGAAAAGCGCTGATCCACGCG CTGCCGGAGCTTGCCGCGCGCCCGGACATGACCGCGCAGTGGGAGTCGACGCTGACGCAAATCAGTGAGAAGCAGTGCCG CTATCAGGATTTCATGCAGCCGCTGGTGCACACGCTCTACACGCTGATTGACCAGGCGCGTAGCGCCCCGGTGCGTCAGT TCCGCGGTCTGGTGGCGCCCCAGCAGGCGCAAAAACGCCGCGCGGGCAAGGGCGGCAAAAAGCCTGCCGCCCGCAAACGC AGCGGCGCGCAACCGGCGACGGAGTAA Protein sequence : MRLFIAEKPSLGRAIADVLPKPHRRGDGFIECGNGQVVTWCVGHLLEQAQPDAYDSRYGRWNLADLPIVPEKWQLQPKPS VAKQLNVIKKLLREAQEIVHAGDPDREGQLLVDEVLDYLQLPAEKRQQVRRCLINDLNPQAVERAIDKLRENREFVPLST SALARARADWLYGINMTRAYTLLGQNAGYQGVLSVGRVQTPVLGLVVRRDEEIEHFVAKDFFEVKAHIVTPAQERFTALW QPSEACEPYQDEEGRLLNRALAEHVVKRIEGQPARVTSYNDKREGEAAPLPFSLSTLQIEASKRFNLSAQAVLDICQKLY ETHKLITYPRSDCRYLPEEHFAGRHAVLKAIGVHASDLLPQPAVDPERRNRCWDDKKVDAHHAIIPTARSAPASLSDGEA KIYGLIARQYLMQFCQDAQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGAKERDEENDGTPLPVVAKGDELHCERGEV VERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGFLEKQGRYIHSTPAGKALIHA LPELAARPDMTAQWESTLTQISEKQCRYQDFMQPLVHTLYTLIDQARSAPVRQFRGLVAPQQAQKRRAGKGGKKPAARKR SGAQPATE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 2e-101 | 41 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 9e-103 | 41 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 3e-103 | 41 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 1e-111 | 41 |
