Gene Information

Name : lpfB (CTU_14020)
Accession : YP_003209765.1
Strain : Cronobacter turicensis z3032
Genome accession: NC_013282
Putative virulence/resistance : Virulence
Product : chaperone protein lpfB
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 1480780 - 1481493 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence : 
CTGACGGCGGCTAACAGCTCTTATTTAAGAGAATTTATTATTATGCGTAAGTTAATTGCTATTTCAGTTTTACTCATGTC
TGCCACTGCTGCACAGGCTGGCGTTATTGTCGGCGGTACTCGCGTAGTATATCAGAGCGATAAAAAAGAGGCTTCCGTCC
CAGTTACTAATAATGATGACATTAATTATTTAATTCAGTCATGGGTAGATACTGATGCAACGGGCGCAGCTAAAGCACCG
TTTATGGTGACACCTCCGCTTTTTCGTCTGGATGCGCACCAGGATAATACGCTGCGCGTAGTACGCACCGGAGGCAACCT
CCCCGAAGACCGCGAGTCGCTGTACTGGTTAAATATTAAATCCATTCCTTCTGCGGCCAAAAAAGAAGGCGTTAACCGCC
TGCAAATCGCCATTAAAACACGCATTAAGTTGATGTATCGCCCGGCCTCAATCAACGGTAAGCCGGAAGATGTCGCGAAT
ATGCTGAAATGGCATACCGAAGGCAATACGCTGGTGGTTGAAAACCCGACATCCTTCTATATGAACTTTAATAACATCAG
CATTAACGGAAATAATCTTAATGATATTAACTTCGCCGTACCAAAAGGTGAAAGCCGCTTTCAATTAGCTAAAGGCATGA
AGCACGGCACGCTTTCATGGACCATTATTAATGACTTTGGCGCCATCAGTAAAACGTGGTCACAGAATATCTGA

Protein sequence : 
MTAANSSYLREFIIMRKLIAISVLLMSATAAQAGVIVGGTRVVYQSDKKEASVPVTNNDDINYLIQSWVDTDATGAAKAP
FMVTPPLFRLDAHQDNTLRVVRTGGNLPEDRESLYWLNIKSIPSAAKKEGVNRLQIAIKTRIKLMYRPASINGKPEDVAN
MLKWHTEGNTLVVENPTSFYMNFNNISINGNNLNDINFAVPKGESRFQLAKGMKHGTLSWTIINDFGAISKTWSQNI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lpfB YP_006098366.1 fimbrial chaperone protein Not tested Tn2411 Protein 4e-37 44
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lpfB YP_003209765.1 chaperone protein lpfB VFG0911 Protein 1e-32 41
lpfB YP_003209765.1 chaperone protein lpfB VFG1644 Protein 1e-32 41
lpfB YP_003209765.1 chaperone protein lpfB VFG0875 Protein 1e-33 41