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Name : lpfC (CTU_14010) Accession : YP_003209764.1 Strain : Cronobacter turicensis z3032 Genome accession: NC_013282 Putative virulence/resistance : Virulence Product : outer membrane usher protein lpfC Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 1478187 - 1480739 bp Length : 2553 bp Strand : - Note : - DNA sequence : ATGCCACTCAGCAATGCCAGACGGAAAAATATTTTTCGCGCCCGTCATTTAGCGCTGGTGATAGCCTGTATTTATACAAG CCTGGCGCTGGCACCTGCGTGGGCAGAGGATTATTTCAACCCGGCATTACTTGATATTGATAATCCTGGTCAGGAAAAAA CCGATTTAACTCTTTATGAAAAAGGACCGGGCCTCGCACCGGGGAAATATCGCGTGGATATCTACGTGAATAATAACCGT ATCGATACCCGTGAAGTGACGTTTACGCTGGCTACCGCCGCCGATGGCAGCAGCGCGTTGCAGCCGTGCCTGACGGTGGA CGATTTAAAAAGCTTTGGCGTGCAGACCGACCGCTTCGACGCGCTGCGCACACCTGCACAATGTGCCGATCTCTCGGTGA TCCCTTCGGCCAGCGCCCGCTTCAACGTGAGCCGTCAACAGCTTCAGCTCAGCATTCCGCAAAGCGCGCTGGGTGAGGTG CCGCGCGGGTATATTCCTCCGGACGAGTTTAATGAGGGTATTAACGCGCTTTTGCTGAATTACAGTGTGAATGGCACACG TCAGAAAGCGCTAACCCCGGATACGCAAGACAGCCGCGACCTGTATGCCAACCTGCGCCCCGGTATTAACATTGGCCCGT GGCGGCTGCGCAATTACTCCACCTGGAGGCGCGCAGAAAACAGCACGGGAACGGAGCAGGACTTTTCCAGTGTCTATACC TACGCACAACGCGACGTGGTGAGCCTTAAAAGCGCCCTGACGCTGGGGCAAAGCAGTTCGCCTGCGGATGTCTTTGACAG TATTCCTTTCACTGGCGCACAGCTTGCGTCTGACGACGACATGCTGCCGGACGGGCTGCGCGGCTACGCGCCGATAGTGC GTGGCATCGCGCGCAGCAACGCGCAGGTCATTATTCGCCAGAACGGTTACGTTATCTCTCAGAACAACGTCGCCCCTGGC GCCTTTGAAATTAATGATCTTTACCCAAGCGGCAGCAGCGGCGATCTGAACGTGACGGTGAAAGAAAGCGATGGTAGCGA ACAACATTTCGCGGTGCCTTACGCTTCTGTCCCTGTCCTGCAACGTGAAGGACGGCTGAAATACAGCCTTACCGGCGGAC GCTATCGGTCTTATGACGATGAGGTGTTACCGACGCCCTTTATCCAGGGCGCGGCGATTTATGGTCTGCCGCATGGGTTT ACGCTCTACGGCGGGATACAGGCCAGCGAGCCATATCATGCACTGGCGGTGGGCGTCGGTGAAAACCTCGGTACGTTTGG CGCGCTCTCGCTGGATATGACGCAGGCAACCTCTACGCTGGCACTGGGCGATAAGCAAACGGGCCGGTCATGGCGCGCAC GCTACAGTAAGGATATTCCTCTGACGGGCGCAACGCTCTCGGTCGCGGGCTACCGCTTTAGCAGCGAAAATTATTACGGA ATGCAGGAAGTGTTTGATGCGCTGCGCTCGGATAACCAGTGGGAAAACCCGCTGCGTCGCCGTCATCGCGCCGAGCTTAC GCTGGAACAACCGCTTGGCGACACGCTGGGTTCCCTGAACGTCAGCCTGCTCAAAGAGAATTACTGGGACAGTCGCCAGG CGATGGCCTCGCTGAGTGTCGGTTACAGCAATAGCTGGCACGGCATCAACTACGGGCTCAACTACAGCCTGAACCGCAAC ACCACTGGATATAACGACGATGAATCCACAAGGCAAAATGACAGCGTATTGTCACTCACGCTCTCCGTCCCGCTTGATCG CTGGTTGCCTGACACCTGGGCCAGTTACAACCAGAACCACAGCAAACAGGGCACCACTCAAAACCTTGGTCTGAGCGGAA CGGCGCTCGCGGGCAATAACCTGAACTGGAATATCCAGCAGAGCCATGACAGCCAGGGCCAGGCGGACAACACTACGCTA AATGCTGATTATAAGGGCGCTTTCGGCGAACTGAGCGCCGGGTACGGCCAGGACTCCAGCCAGCGCCAGATCCACTATGG CCTCCAGGGCGGCATTATCGCTCACGCTCACGGCGTAACGCTGGGGCAGCCCATGGGGGAAACCGTCGCGCTGGTGGAAG CGCCTGGCGCCAATGGCACCGCTATCGCCAACCAGACCGGGCTTGCCACGGATGGGCGCGGCTACACCATCGTGCCTTTT GTCAGCCCCTACCGCCGAAACGCCATTGCGCTTGATACCGAAACGCTGCCTGCCGACGCTGACGTGACGCAGGCAGTACA AAGCGTGACGCCGACGCGCGGGGCAATAGTGCGCGCCCGCTTCGATACCCGAACAGGCGCTCGCGCATTGATGACCTTAT TACGTGCAGACGGCCACCCGGTGCCGTTTGGCGCGACCGCCACGGATGCCGACGCCACCGACGCTTTTATCGTCGGCGAA GACGGTCAGGTGTATCTGACCGGGCTCAAGCCACAGGGCACGCTGCAGGTGAGCTGGGGGAAAAACGCCAGCCAGCATTG CGTTGCCGCCTGGCAACTGCCCTCCGTAAACGCCGCCACCCCGTTTATTACTCTCTCCGCGCAGTGTGTGTAA Protein sequence : MPLSNARRKNIFRARHLALVIACIYTSLALAPAWAEDYFNPALLDIDNPGQEKTDLTLYEKGPGLAPGKYRVDIYVNNNR IDTREVTFTLATAADGSSALQPCLTVDDLKSFGVQTDRFDALRTPAQCADLSVIPSASARFNVSRQQLQLSIPQSALGEV PRGYIPPDEFNEGINALLLNYSVNGTRQKALTPDTQDSRDLYANLRPGINIGPWRLRNYSTWRRAENSTGTEQDFSSVYT YAQRDVVSLKSALTLGQSSSPADVFDSIPFTGAQLASDDDMLPDGLRGYAPIVRGIARSNAQVIIRQNGYVISQNNVAPG AFEINDLYPSGSSGDLNVTVKESDGSEQHFAVPYASVPVLQREGRLKYSLTGGRYRSYDDEVLPTPFIQGAAIYGLPHGF TLYGGIQASEPYHALAVGVGENLGTFGALSLDMTQATSTLALGDKQTGRSWRARYSKDIPLTGATLSVAGYRFSSENYYG MQEVFDALRSDNQWENPLRRRHRAELTLEQPLGDTLGSLNVSLLKENYWDSRQAMASLSVGYSNSWHGINYGLNYSLNRN TTGYNDDESTRQNDSVLSLTLSVPLDRWLPDTWASYNQNHSKQGTTQNLGLSGTALAGNNLNWNIQQSHDSQGQADNTTL NADYKGAFGELSAGYGQDSSQRQIHYGLQGGIIAHAHGVTLGQPMGETVALVEAPGANGTAIANQTGLATDGRGYTIVPF VSPYRRNAIALDTETLPADADVTQAVQSVTPTRGAIVRARFDTRTGARALMTLLRADGHPVPFGATATDADATDAFIVGE DGQVYLTGLKPQGTLQVSWGKNASQHCVAAWQLPSVNAATPFITLSAQCV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 1e-147 | 41 |
| safC | NP_454907.1 | outer-membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 2e-142 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lpfC | YP_003209764.1 | outer membrane usher protein lpfC | VFG0454 | Protein | 2e-154 | 42 |
