Gene Information

Name : DAMO_0042 (DAMO_0042)
Accession : YP_003205010.1
Strain : Candidatus Methylomirabilis oxyfera
Genome accession: NC_013260
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 32635 - 33357 bp
Length : 723 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter

DNA sequence :
GTGAATGAGACCGCCGCTCCGCCGCTGCTGATCGACATCCGCAACGTTGCAAAGTCCTACCGGCGAGGCGGACAGATCGT
GCCGGTACTGACCGACATCACCCTCGAGGTGCGTACGGGCGACTTCCTCGGCCTGATGGGCCCGTCGGGATCGGGTAAGT
CGACGCTGCTCAACCTGATCGCCGGCATCGACAAACCCGACACCGGGGAGATTCTCTTCGACGGTATCGATATCACCCGC
CTGTCTGAGGCCGAGCTTGCAGATTGGCGCGCAGGGACGGTCGGCTTCATCTTTCAGTTCTATAACCTAATCCCGGTCCT
GACAGCCTTCGAGAACGTTGAACTGCCGCTCACACTGACGCGGCTGACCCGACACGAGCGGCGCGAGCACGTCGAGGCGG
CGCTCGAACTCGTCGGTCTGTCGGATCGCATGGCACATTACCCCTCGGAGCTGTCCGGCGGGCAGCAACAGCGTGTCGCC
ATCGCGCGCGCGATCATCGCCGACCCGCGGCTGATCGTGGCCGACGAGCCGACCGGCGATCTCGATCGCCACTCGGCCGA
GGAGGTGCTCACGCTCATGGATCGCCTGAACACCGACCTTGGCAAGACGATCGTGATGGTCACGCACGACCGTCGCGCCG
CCGACCAGGCCCACGCCATCATGTATTTGGATAAAGGGGAGCTGTCAACAGCGGACGATGTCCATGAGCGATCGTTGAGG
TAA

Protein sequence :
MNETAAPPLLIDIRNVAKSYRRGGQIVPVLTDITLEVRTGDFLGLMGPSGSGKSTLLNLIAGIDKPDTGEILFDGIDITR
LSEAELADWRAGTVGFIFQFYNLIPVLTAFENVELPLTLTRLTRHERREHVEAALELVGLSDRMAHYPSELSGGQQQRVA
IARAIIADPRLIVADEPTGDLDRHSAEEVLTLMDRLNTDLGKTIVMVTHDRRAADQAHAIMYLDKGELSTADDVHERSLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-22 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-24 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-22 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DAMO_0042 YP_003205010.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-31 49
DAMO_0042 YP_003205010.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-27 46
DAMO_0042 YP_003205010.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-29 41