Gene Information

Name : kdpA (DAMO_0410)
Accession : YP_003205337.1
Strain : Candidatus Methylomirabilis oxyfera
Genome accession: NC_013260
Putative virulence/resistance : Unknown
Product : high-affinity potassium transport system P-type ATPase, , A chain
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.9
Position : 357519 - 359324 bp
Length : 1806 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15292155; Product type t : transporter

DNA sequence :
GTGACCGCGAACGGCTATGCCCAGTTGGGATTGTACATGGTCGTCCTGCTTGCCCTCGCCAAACCGCTCGGCGCCTATAT
GGCCCGCGTCTATGAGGGCCGACCGTTCGGCCTCGATCGACTCCTTGGCCCGTTCGAGCGGTGGATCTACCGCCTCTCGG
GGATCCGCGCAGACGACGAGATGCGATGGCAGACATACGCAAGGGCGATGCTGCTCTTTAACCTGACAGGCGTGCTAATG
GTCTATGCCCTCCAGCGGATGCAGGGTCTGCTCCCGCTCAATCCGCAGTCGCTCGGACCGGTGTCGCCTGACTCCGCGTT
CAACACCGCCGTCAGTTTCGCCACAAACACCAACTGGCAGGGGTACGGAGGCGAGACCACGATGAGCTACCTGACGCAGA
TGCTGGGGCTGACGGTCCAGAACTTCCTCTCGGCGGCGACCGGCATGGCGGTTCTCGTGGCCTTCATTCGCGGCCTGGCG
CGTCGCTCCGCCCAGACCATCGGCAGTTTCTGGGTGGACCTCACCCGCACCACCCTCTATATCCTCCTGCCGCTCTCGCT
CGTCCTCGCCCTGGCGCTGGCGTCGCAGGGGGTCGTGCAGACGTTTGGGCCATACGCCAAGGCGAGTGTCGTTCAACCAA
CCACCTACGACGAACCGGTGACGGACAAAGACGGGACACCTGTGCTCGACGAGAAGGGCCGGCCGGTGACGAAAAAGGCG
AGGTTGACGGAGCAGGTGATCGCGCTCGGCCCCGTCGCGTCCCAGGTTGCCATTAAGCAGCTCGGGACTAATGGCGGCGG
TTTCTTCAACGTGAACTCGGCGCATCCCTATGAGAACTCGACACCTCTCTCGAACTTCCTCGAGTTGCTGGCCATCCTGT
TGATTCCCGCGGCCCTCTGTCACACCTTCGGGGTCATGGTCAAGGATACGCGCCAGGGCTGGGCTATCCTCGCGGCCATG
ACCATCATGTTCGTCGGCCTGCTCGCCCTCTGCGTCGGCGCTGAGCAAGGCGGCAATCCCCTGCTGACCGGACTGGGGAT
CGATCAGCACGCCGGCGAGCTGCAGGCGGGCGGCAACATGGAAGGGAAGGAGGTCCGCTTCGGCATCGTCAACTCGGCGC
TGTGGGCCACGGCGACGACCGCGGCCTCCAACGGCTCGGTGAATGCGATGCACGACTCCTTCACACCGCTGGGCGGCCTG
GCTCCGATATGGCTGATACAGCTTGGGGAGGTCGTCTACGGCGGCGTCGGCTCGGGGCTGTACGGCATGCTGGTCTTCGC
CATCATTGCCGTGTTCGTGGCGGGCTTGATGGTGGGGCGCACACCCGAGTATCTGGGGAAGAAGATCGAGGCCTACGAAA
TGAAGATGGCCTCCCTGGTGATCCTGATCCCTCCCGCCCTGGTGTTGCTTGGCACAGCGGTCGCCGTTGTCACCAGTGGC
GGCAAGGCCGGGATCTCAAACCCCGGCCCCCACGGCTTCAGCGAAATCCTGTACGCCTTCTCCTCGGCCGGCAACAACAA
CGGAAGCGCCTTTGCCGGCTTAGGCGCCAACACGCCCTTTTATAACATCTCGCTGGGGGTGGCGATGTTCTTTGCTCGCT
ACTGGCTGGCCATCCCGACCCTGGCGATCGCGGGGTCGCTCGCCGGCAAGAAGCCCGTCCCGCCCGGCCCAGGGACTCTC
CCCACCCACACCCCCCTCTTTGTGGCGCTTCTCATCAGCGTTGTGGTCATTGTCGGGGCGCTGACGTTTTTTCCGGCGCT
CGCCCTGGGACCCATCGTGGAGCATCTGATCATGATGTCGTCATAG

Protein sequence :
MTANGYAQLGLYMVVLLALAKPLGAYMARVYEGRPFGLDRLLGPFERWIYRLSGIRADDEMRWQTYARAMLLFNLTGVLM
VYALQRMQGLLPLNPQSLGPVSPDSAFNTAVSFATNTNWQGYGGETTMSYLTQMLGLTVQNFLSAATGMAVLVAFIRGLA
RRSAQTIGSFWVDLTRTTLYILLPLSLVLALALASQGVVQTFGPYAKASVVQPTTYDEPVTDKDGTPVLDEKGRPVTKKA
RLTEQVIALGPVASQVAIKQLGTNGGGFFNVNSAHPYENSTPLSNFLELLAILLIPAALCHTFGVMVKDTRQGWAILAAM
TIMFVGLLALCVGAEQGGNPLLTGLGIDQHAGELQAGGNMEGKEVRFGIVNSALWATATTAASNGSVNAMHDSFTPLGGL
APIWLIQLGEVVYGGVGSGLYGMLVFAIIAVFVAGLMVGRTPEYLGKKIEAYEMKMASLVILIPPALVLLGTAVAVVTSG
GKAGISNPGPHGFSEILYAFSSAGNNNGSAFAGLGANTPFYNISLGVAMFFARYWLAIPTLAIAGSLAGKKPVPPGPGTL
PTHTPLFVALLISVVVIVGALTFFPALALGPIVEHLIMMSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 2e-64 48
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 3e-64 48
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 4e-54 41
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 4e-54 41
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 4e-54 41
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 4e-54 41
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 4e-54 41
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 3e-54 41