Gene Information

Name : DAMO_3056 (DAMO_3056)
Accession : YP_003207928.1
Strain : Candidatus Methylomirabilis oxyfera
Genome accession: NC_013260
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2648746 - 2649423 bp
Length : 678 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter

DNA sequence : 
ATGATCAGGTTACAGCAGGTTTCGAAGATCTATTCGCTGGGGAAGGTTCTCGTGCGGGCCCTGGATAGGGTCACGCTGAC
CATCGGGCCGGGGGAGTTCGTCGCGTTGGTCGGGCCGAGCGGTTGCGGTAAGAGCACCCTGCTCAACCTGATGGCCGGGA
TCGACCGGCCGACGTCGGGTGAGGTATGGCTTGATGGAGAGCGCCTGGATCGCCTGTCCGACGATAGCCTGACGCGGCTT
CGCCGGAGTAGGGTTGGGATCGTCTACCAGTTTTTTAACCTGCTACCGACACTCACCGCCAGAGAAAACGTCGCCCTGCC
TCTGCTGCTGGATGGGGTGCAGCGCGCTGACGTCGAACGGCGCGTTGAGCGTGGGCTGCAACGGGTAGGTTTGGTACATC
GCGCGGAGCACTGGCCCCATGAGCTGTCCGGCGGGGAACAGCAGCGGGTGGCCATAGCCCGAGCGATCGTGGCCGAGCCG
CGGGTTGTCCTGGCCGACGAGCCGACCGGAAACCTGGATTCGGTGGCAGGCAGCGCGGTCCTGGATCTGCTCGAGGAGCT
GTATCAGGATTACGGTCAGACGATCGTCCTAGCCACCCACAGCCCGGAGGCTGTGAGAAGGGCCGGTCGGATCATCCCCC
TCTGTGACGGACGGATAGAGGGGCTCGAGGGATCCTGA

Protein sequence : 
MIRLQQVSKIYSLGKVLVRALDRVTLTIGPGEFVALVGPSGCGKSTLLNLMAGIDRPTSGEVWLDGERLDRLSDDSLTRL
RRSRVGIVYQFFNLLPTLTARENVALPLLLDGVQRADVERRVERGLQRVGLVHRAEHWPHELSGGEQQRVAIARAIVAEP
RVVLADEPTGNLDSVAGSAVLDLLEELYQDYGQTIVLATHSPEAVRRAGRIIPLCDGRIEGLEGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-29 44
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DAMO_3056 YP_003207928.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 8e-39 50
DAMO_3056 YP_003207928.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-36 44
DAMO_3056 YP_003207928.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 7e-35 44
DAMO_3056 YP_003207928.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-37 43