Gene Information

Name : xerD (DAMO_2998)
Accession : YP_003207870.1
Strain : Candidatus Methylomirabilis oxyfera
Genome accession: NC_013260
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2591519 - 2592406 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence :
ATGGACAATCTGATCGAGGACTACTTGAGGTATCTGGCGGTCGAGAAGGGGCTGGCAGAGAACAGTCTGGCGGCGTATGG
GAGGGACCTGCGCCGGATAGTCGGCTACTTCAAGCAGGGCGGGGTCGGTTCATTCCGGGAGGTCAGCCGCGGGCAGGTTG
CGCGCCTGCTCTTAACGCTTCGAGAGGCGGGGCTGGCGCCCCGCACGGTCTCGCGCCACACCTCGTCGCTGCGGGGTCTA
TACCGGTACCTGCTGACGCAGGATCATGTAAAAGAGGATCCTACCGCGCACCTCGAGTCGTCGAGTCCCTGGGTGCGTCT
GCCCGGCGTGCTGAGCCAGGAGGAGGTGGAGCGACTGCTGGCGGCGCCGCTCACCAGCAATCCTCTGGGTCTTCGTGACA
AGGCCATGCTGGAACTGTTGTACGCGGCCGGCCTGCGCGTATCGGAGATGGTGACTCTCCGGCTGTCCGAAGTAGACCTG
GAGGTGGGCTATGTGCATTGTCAAGGCAAGGGCGGGAAAGACCGCGTGGTGCCGTTAGGGCGCGATGCCCAGACGGCAGT
TCGCCGGTATCTTGAGACATCACGGCCATATCTTCAAAGAGGATGGTCAAGCTCTACACTGTTCCTCAATCGCTTCGGGT
ACCCGTTGACGCGCCAAGGTTTCTGGAAGCTCCTCCGCGCGTATGCGATAGCGGCGGGGATTGACCGGCGAGTCACCCCC
CACACGCTTCGCCATTCATTTGCCACGCACCTGCTCGAGCGCGGCGCCGACCTCCGGGCAGTCCAGATGATGTTGGGTCA
TGCCGATATCTCGACGACACAGATCTACACACACGTCTCCAGGGCGCACCTGAAGACGGTCTACAACCGCTACCATCCGC
GGGCATAA

Protein sequence :
MDNLIEDYLRYLAVEKGLAENSLAAYGRDLRRIVGYFKQGGVGSFREVSRGQVARLLLTLREAGLAPRTVSRHTSSLRGL
YRYLLTQDHVKEDPTAHLESSSPWVRLPGVLSQEEVERLLAAPLTSNPLGLRDKAMLELLYAAGLRVSEMVTLRLSEVDL
EVGYVHCQGKGGKDRVVPLGRDAQTAVRRYLETSRPYLQRGWSSSTLFLNRFGYPLTRQGFWKLLRAYAIAAGIDRRVTP
HTLRHSFATHLLERGADLRAVQMMLGHADISTTQIYTHVSRAHLKTVYNRYHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-50 41
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-50 41