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Name : smpB (DAMO_2561) Accession : YP_003207435.1 Strain : Candidatus Methylomirabilis oxyfera Genome accession: NC_013260 Putative virulence/resistance : Unknown Product : trans-translation protein, binds tmRNA and tRNA (SsrA-binding protein) Function : - COG functional category : - COG ID : - EC number : - Position : 2201059 - 2201532 bp Length : 474 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10393194; Product type f : factor DNA sequence : ATGGCACAGACGCAGGAAAAAAGAATCCTCTGCTCCAATCGGCGGGCGAGGTATGAGTACCAGATCGAAGAGGTCATCGA GGCCGGGATAGCTCTCACCGGGACCGAGGTAAAATCACTGCGGGAGGGCGGGGCCGACCTGAAAGACAGCTACGCCGCGA TCGAGGACGAGGAGGCATATCTGTTTAACTGTCACATCAGTCCGTATGCCGCCGGCAACCGGTTCAATCCGGATCCGAAT CGGACGCGAAAACTCCTGTTGCACCGTGAGGAGATCATGAGACTCATGGGGAAGGTTCAGACAAAGGGCCTCACCGTGAT CCCCTTGAGTGTCTATGTGGCTGGGCGGAAGATCAAGGTAGAGCTGGCCTTGGCCCGAGGGAAGAAGCTGTACGACAAGC GGGAAACCCTGAAGCAGCGCGCGATGACGAAAGAGATGGCCCAGCTCGCTCGCGGCTGCGCCGACCGGGGGTAA Protein sequence : MAQTQEKRILCSNRRARYEYQIEEVIEAGIALTGTEVKSLREGGADLKDSYAAIEDEEAYLFNCHISPYAAGNRFNPDPN RTRKLLLHREEIMRLMGKVQTKGLTVIPLSVYVAGRKIKVELALARGKKLYDKRETLKQRAMTKEMAQLARGCADRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 1e-32 | 53 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 4e-27 | 48 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 6e-22 | 41 |
