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Name : clpB (DAMO_1654) Accession : YP_003206543.1 Strain : Candidatus Methylomirabilis oxyfera Genome accession: NC_013260 Putative virulence/resistance : Virulence Product : chaperone Function : - COG functional category : - COG ID : - EC number : - Position : 1405474 - 1407906 bp Length : 2433 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12054807, 12220194; Product type f : factor DNA sequence : ATGTTCGAGCGATTTACAGAGCGAGCCCGCAAGGTCATTATCCTGGCCCGGGAAGAAGCGATCCGCCTTGGACATAACTT CGTCGGGACCGAGCATCTGCTGCTCGGACTGATCCGCGAGGGCGACGGACTCGCGGTTGCGATTCTCAAGAAGCTGAACG TGAATATCTCCGCAGTCAAGGGAGAGATCGAGAAGATCGTCTCGGTCGGCTCCGAGTTCAGCCCCGCCGGAGAGATCCCT TTTACGCCGCAGGCGAAGAAGGTCCTGGAATACGCCATCTCTGAAGCCAGATCGCTCGGACACAACTATATTGGGACCGA GCATCTGCTGCTCGGACTGATCCGCGAGGGCGAGGGGATCGCCTCATTGGTTCTGAGGGACTTCGGCGTCAGCGTCGCCT CAGCCAAGGCGCAGGCCCAGGAGTTGCTGGGCGAGCAGGCCTCCAAGCCCACGACCTCGACCAGGACGCCGGCGCTGGAT GAGTTCGGCGTAGACCTGACCGCGATGGCGCGCCAGGACCGCCTGGATCCCGTGATCGGCCGCGAGACGGAGATTGAGCG GGTCATCCAGATTCTCTCGCGTCGGACTAAGAACAATCCGGTCCTGATCGGGGAGGCCGGCGTCGGAAAGACCGCCATTG TGGAAGGGCTTGCCCAACGGATCGTGGCCAGCAATGTGCCGGAGACCCTGCTGCGGAAGCGGGTCGTCCAGCTTGACCTC GCCGGCATGGTGGCCGGAACCAAGTATCGCGGTCAGTTCGAGGAGCGGCTCAAGGCCGTCGTCAAGGAGATTCAGCAGTC GCAGAGTATCATCCTGTTCATCGATGAGTTGCATACGTTAGTGGGTGCCGGCGCCGCAGAGGGCGCGATCGATGCGTCCA GCATGTTGAAGCCGGCGCTCGCGCGAGGGGAGCTGCAGTGCATCGGCGCAACCACCCTCGACGAGTATCGCCGCCACATT GAAAAGGACCGGGCGTTGGAGCGACGGTTCCAGGCGGTCCAGGTCGGGCCGCCGAGCGTGGAGGAGACGATTCGGATCCT CCGGGAGATCAAGGATCGTTATGAGGCGCATCACTGCGCGATCATTACCGACGAGGCGGTGACGGCTGCTGCGCGCCTGT CGCAGCGCTACATCGCCGACCGCTTTCTTCCAGATAAGGCCATTGATGTGATCGACGAGGCCGGCTCGCGGGCGCGGTTG AAAACCCTGATGCTGCCGCAGGATCTCCGCGAGATGGAGAACGAGGTTGAGCGTCTCCGGGCCCAGAAGGAAGATGCAAT CCGGACTCAGGCCTTTGAGGTCGCGGCCAGGCTCCGCGACTCGGAGCGTAAGCTTCGGACTGAATTGGAAGAGAAGAAGG CCCACTGGAAGGAGTCCAGGGCGAAGGAAAAAACCATGGTGACGGCCGAGGAGGTGGCCTACATCGTCTCCAAGTGGACC GGCATTCCGCTGTACCAGATCGAGGAGGAGGAATCGGCCAAGCTGATGCGGATGGAGCAGGATCTGACCAAACGGGTGGT AGGGCAGATCGAGGCTATCGAGAGCGTCAGTCGCGCGATTCGCCGTTCGCGGGCCGGGATCAAGAGCCCGAGTCGTCCCG TCGGGTCGTTCATCTTTCTGGGGCCGACCGGCGTCGGGAAGACTGAGCTGGCCAAGGCGCTGGCGGAATTTCTGTTCGGA ACGGAGGACGCGCTGATCCGTGTTGACATGTCGGAGTATATGGAGCGCTTTTCTACCTCACGGCTTATCGGCGCGCCACC TGGATATATCGGATACGACGATTCGGGTCAGCTCACTGAGAAGGTCCGGCGCCGGCCCTTTTCGGTCATCCTTCTGGATG AGATCGAAAAAGCCCACCCGGAGGTATTCAATCTGCTCCTCCAGATCTTCGAGGATGGTCGCCTGACCGACAGTTATGGT CGTATTGTTGACTTTAAGAATACCATCCTCATCATGACGAGCAATATCGGCGCCCGTCAGATCGGTCTCCACACCGCCAT GGGCTTCGCCAAGGGCGGTGACGAGGCGGTTACGTACGATAAGATGAGAGACACCGTCCTGGGCGAACTGAAACGGGTCT TTAACCCCGAACTGCTCAACCGGCTCGATGAGGTGATCGTCTTCCACCAGTTGAGTAAAAATGAGCTCTGTAAGATCGTG GATCTTCTGCTCGCCCGTTTGCAGCTTCAGCTCGCTGAGCGTAAGATCTCACTCGCGGTCGATGAGAGCGCGAAAGAGTT TCTGATCAATAGAGGGTTTGACCCGACTCTTGGCGCCAGGCCGCTGCGCCGTGCCATCCAGCGCTATGTGGAGGACCGAT TAGCCGAAGAGGTGTTGAAGGGGCGGTTTGCAGAAGGGGGCACTCTGAGAGTAAAGCTGGAGGGAGACGCCTTAGCATTT GAAGAGGTCAGCCTTCTCGAAGCTCCTAAATAG Protein sequence : MFERFTERARKVIILAREEAIRLGHNFVGTEHLLLGLIREGDGLAVAILKKLNVNISAVKGEIEKIVSVGSEFSPAGEIP FTPQAKKVLEYAISEARSLGHNYIGTEHLLLGLIREGEGIASLVLRDFGVSVASAKAQAQELLGEQASKPTTSTRTPALD EFGVDLTAMARQDRLDPVIGRETEIERVIQILSRRTKNNPVLIGEAGVGKTAIVEGLAQRIVASNVPETLLRKRVVQLDL AGMVAGTKYRGQFEERLKAVVKEIQQSQSIILFIDELHTLVGAGAAEGAIDASSMLKPALARGELQCIGATTLDEYRRHI EKDRALERRFQAVQVGPPSVEETIRILREIKDRYEAHHCAIITDEAVTAAARLSQRYIADRFLPDKAIDVIDEAGSRARL KTLMLPQDLREMENEVERLRAQKEDAIRTQAFEVAARLRDSERKLRTELEEKKAHWKESRAKEKTMVTAEEVAYIVSKWT GIPLYQIEEEESAKLMRMEQDLTKRVVGQIEAIESVSRAIRRSRAGIKSPSRPVGSFIFLGPTGVGKTELAKALAEFLFG TEDALIRVDMSEYMERFSTSRLIGAPPGYIGYDDSGQLTEKVRRRPFSVILLDEIEKAHPEVFNLLLQIFEDGRLTDSYG RIVDFKNTILIMTSNIGARQIGLHTAMGFAKGGDEAVTYDKMRDTVLGELKRVFNPELLNRLDEVIVFHQLSKNELCKIV DLLLARLQLQLAERKISLAVDESAKEFLINRGFDPTLGARPLRRAIQRYVEDRLAEEVLKGRFAEGGTLRVKLEGDALAF EEVSLLEAPK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003206543.1 | chaperone | VFG0079 | Protein | 0.0 | 60 |
| clpB | YP_003206543.1 | chaperone | VFG0080 | Protein | 7e-155 | 51 |
