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Name : clpB (DAMO_1073) Accession : YP_003205972.1 Strain : Candidatus Methylomirabilis oxyfera Genome accession: NC_013260 Putative virulence/resistance : Virulence Product : chaperone Function : - COG functional category : - COG ID : - EC number : - Position : 904360 - 906957 bp Length : 2598 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12054807, 12220194; Product type f : factor DNA sequence : ATGGCCTTTATGCGATTCGATAAATTTACCTTTAAGGCGCAGGAGGCGATTCAGCAGGCCCAGAAGCTGGCTGAGCAGCT GGAGCATCAGGCAATTGATGTTGAGCACCTGTTGTTAGCGCTTGTACAACAGGCGGAAGGGGTCGTCCAGCCGATTCTGG GAAAGATGGGGACTGACCCCCGTCAGGTCGCCTCCAGACTCACAGAGGAACTGAAGCGACTTCCCAGGGTCTCCGGGCTT CCACCAGGCCAGGTCCATATCACTCCACGTCTTGAAAAGGTGCTGAGCGCCGCGCTGTCTGAGGCGGAACGCTTGAAAGA TGAGTACGTCAGCACCGAGCATCTGCTTCTGGCGATTGCCGACGCGGGCGGTGGCGCCGTCGGGAGGGTCCTGCGCGAGG CTGGGATTACAAAAGACACTATTTACGCAGCTTTGCAGGAGGTTCGCGGCAGCCAGCGAGTCACCGATCAGGTTCCGGAG GAAAAGTACCAGGCGTTGGAACGGTACGCCCGCGATCTCACCGATCTGGCCAGAAAAGGGAAGCTGGACCCGGTCATCGG TCGAGACGATGAGATCCGTCGAGTGGTTCAGGTCCTGGCGCGCCGAACCAAAAACAACCCGGTTCTCATTGGTGAGCCCG GCGTGGGGAAGACCGCCATCGTAGAAGGACTGGCGCAGCGAATCGTCAATGGCGACGTACCGGAGTCGTTGAAGAATAAG CGTGTGCTGGCGCTGGATATTGGCGCACTGGTGGCCGGGAGTAAGTACCGCGGGGAGTTCGAAGACCGGCTGAAGGCGGT CCTTCGGGAGGTGACCGAGCAGCAGGGTCAGATTGTTCTCTTCATCGATGAACTCCATACCCTTGTTGGAGCCGGCGCTG CTGAAGGGGCCGTGGATGCCTCGAACATGCTCAAGCCGGCGCTGGCTCGAGGAGAGCTTCGGTGTGTGGGGGCTACGACA CTGGACGAATACCACAAGCGGGTAGAGAAAGACGCAGCGCTAGAACGGCGCTTCCAACCGGTCCTGGTCGGCGAGCCGTC GGTAGAAGATAGCATCTCGATTCTTCGCGGGCTGAAGGAACGGTACGAGGTGCACCACGGTGTAAGGATCAGGGACTCGG CGCTGGTGGCGGCCGCCATCTTAAGCAACCGGTACATCACCGACCGGTTCTTGCCGGACAAAGCGATCGACCTGATCGAT GAGGCGGCGTCTCGTCTGCGGATGGAGATCGACAGCATGCCGACGGAGCTGGACGAGCTCAGTCGGCGAATACGACAGAT CGAGGTCGAATACCACGCTCTGAAGAAGGAGACCGATTCAGAGTCGCAGGAACGCCTCGCGCGTCTGGCCGACGAGCTCG TGGAGATCCGGATCAAGGAGGAAGGTCTCAAGACCCGCTGGGAGCAGGAGAAGGGATTCATCCAGCGAATCAGGGGCCTC AAGGAGCGGATCGAGGCGGCGAAGGTGCAGGAGCAGATGGCGGAGCGACAGGGCGATCTGGGAAAGGTCGCCGAACTCCG CTATGGTGTGGTTACATTGCTGCAAAAGGAGTTGGAAAGCGAAAAGCGCGGGCTGGAACAGGTCCAGCAGGTTGGCGCCA TGCTCAAGGAGGAGGTAGACGAGGAAGATGTCGCCCAAGTCGTCTCTAAGTGGACCGGGGTTCCGGTTGCCAGGATGCTG GAAGGCGAAACCCAGAAGCTCCTGACCATGGAGGAGAAGCTCAGGGAGCGAGTGGTGGGGCAGTACGAGGCGATTGGCGC AGTGAGTGACGCGATCCGGCGCGCCCGCTCCGGGCTTCAGGATCCGAACCGGCCGATCGGCTCCTTCATGTTCCTGGGGC CGACGGGTGTTGGAAAGACCGAGCTGGCCCGGGCATTGGCCGCGTTCCTGTTCGACGACGAGCGGGCGATGATTCGCCTG GACATGAGCGAGTACATGGAGAAGCATACCGTCTCTCGCCTCATCGGCGCGCCGCCTGGCTACGTCGGGTTCGAGGAGGG GGGACAGCTCACTGAGGCGGTTCGGCGTCGCCCCTACTGCGTCCTGCTCCTGGACGAGATCGAAAAGGCCCACACCGATG TCTTCAATATCCTGCTGCAGATTCTGGATGATGGACGGCTGACCGATGGGCAGGGGCGAACCGTGGACTTCAAAAACACG ATCATCATCATGACCAGCAACCTGGGGAGTCAGGTCATTCAGGAGTTAGGCGGTCGCGATGATGAGGAGATGCGTCGGCG AGTACTGGAGGCCGTAAGAACTCACTTTCGGCCGGAGTTCCTGAACCGAGTAGACGAGATACTGATTTTCCACACTCTCT CGCTGGCTCAGATCAAAGCGATTGTGGAGATCCAGCTCAGGCGGGTGGGGAAGCGGCTTGTCGAGCGGAAGCTCGATCTT GAGGTCACGGATGCGGCAAAGGACTTTCTGGCCAAAGAAGGATACGATCCGGTCTTTGGGGCGAGACCGCTCAGGCGAGC CATCCAGCGAGCGCTGTTGGATCCCTTGGCGCGTCGTCTGTTGGAGCATGAGTTTGCCGAAGGCGACACCGTGAGGGTCG ATGCGGCTCGCGGAGAACTGATCCTGAGTAAGGATTGA Protein sequence : MAFMRFDKFTFKAQEAIQQAQKLAEQLEHQAIDVEHLLLALVQQAEGVVQPILGKMGTDPRQVASRLTEELKRLPRVSGL PPGQVHITPRLEKVLSAALSEAERLKDEYVSTEHLLLAIADAGGGAVGRVLREAGITKDTIYAALQEVRGSQRVTDQVPE EKYQALERYARDLTDLARKGKLDPVIGRDDEIRRVVQVLARRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPESLKNK RVLALDIGALVAGSKYRGEFEDRLKAVLREVTEQQGQIVLFIDELHTLVGAGAAEGAVDASNMLKPALARGELRCVGATT LDEYHKRVEKDAALERRFQPVLVGEPSVEDSISILRGLKERYEVHHGVRIRDSALVAAAILSNRYITDRFLPDKAIDLID EAASRLRMEIDSMPTELDELSRRIRQIEVEYHALKKETDSESQERLARLADELVEIRIKEEGLKTRWEQEKGFIQRIRGL KERIEAAKVQEQMAERQGDLGKVAELRYGVVTLLQKELESEKRGLEQVQQVGAMLKEEVDEEDVAQVVSKWTGVPVARML EGETQKLLTMEEKLRERVVGQYEAIGAVSDAIRRARSGLQDPNRPIGSFMFLGPTGVGKTELARALAAFLFDDERAMIRL DMSEYMEKHTVSRLIGAPPGYVGFEEGGQLTEAVRRRPYCVLLLDEIEKAHTDVFNILLQILDDGRLTDGQGRTVDFKNT IIIMTSNLGSQVIQELGGRDDEEMRRRVLEAVRTHFRPEFLNRVDEILIFHTLSLAQIKAIVEIQLRRVGKRLVERKLDL EVTDAAKDFLAKEGYDPVFGARPLRRAIQRALLDPLARRLLEHEFAEGDTVRVDAARGELILSKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-147 | 50 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 5e-97 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 7e-97 | 42 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-103 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003205972.1 | chaperone | VFG2076 | Protein | 1e-114 | 44 |
| clpB | YP_003205972.1 | chaperone | VFG2084 | Protein | 9e-100 | 41 |
