Gene Information

Name : Namu_0891 (Namu_0891)
Accession : YP_003200291.1
Strain : Nakamurella multipartita DSM 44233
Genome accession: NC_013235
Putative virulence/resistance : Unknown
Product : Integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 983252 - 984508 bp
Length : 1257 bp
Strand : +
Note : PFAM: Integrase catalytic region; KEGG: mlo:mlr9230 hypothetical protein

DNA sequence :
ATGGCGTCTCGGGCGGAGATCACCACCAGGTACGCCAAGGCGTTCAAGGCTGCGGACAGGCGTACGAAGGGCCGGATCCT
GGACGAGGTGGTGTCCGTGACGGGCTGGTCGCGGGACAACGCCCGGCGACGGTTGACCAGCGCCGCGCAGTGCCCGCCGG
GCGGCGGCCGACAGGTCGCCCAGCGGCCCAGGAAGCAGCGGGCGAACAAGTTCTCCTACGAGGCGTTAAAGGTCCTCCAG
CGGGTCTGGGCGGCTTCCGGTGGGCAGTGCGGCAAGTACCTGGCCGCATCGATGGACACGCAACTGGACGGGCTGGAACG
GCACGGGGAGCTGGTCGACGGCGAGGGCCGGTACAGCGCTTCGGTGCGGGCCGAGCTGCTCGCGATGTCGCCGGCGACGA
TCGACCGCTACCTGCGGACCGCGAAGGCCACCGACCAGGTCCGCGGTGTCTCGACCACGAAACCGTCACCGTTGCTGCGG
TCCTCGATCAAGATCCGTAAGGCGGGCGACGAGGTCGAGGCCGAGCCCGGCTTCTTCGAGGGCGACACGGTTGCGCATTG
CGGCCCGACCCTGCGGGGCGAGTTCGCTCGCTCGGTGAACCTGACCTGTGTGCATACCGGGTGGGTCTTCACCCGCTCGA
CGCGCAACAACGCGCACGCCAACATCCTGGCCGCGCTGCAGGCCGGGGTGCAGGAGATCCCTTTCGCGGTCACCGGTCTG
GACTTCGACAACGGAGGTGAGTTCCTGAACCGGGCCGTCATCAAATGGGCCGCCGAGCAAGACATCTACTTCACCCGGTC
CCGGCCGTACAAGAAGAACGACCAGGCCACGATCGAGTCGAAGAACAACCACCTGGTCCGCCGGTACGCGTTCTACTACC
GGTACGACACCGACGAGGAACGACACGCGTTGAACCGGCTCTGGAAGCTGGTCAACGACCGGCTCAACTACCTCACCCCG
ACGATCAAGCCGGTCGGCTGGGGCGAGAACAAGGCCGGTCGCCGCAAACGCCTTTACGACAAGCCGCAAACCCCGTTGAG
TCGGCTGCTGGCCGCCGGCACGCTGTCGCCGGCGCAAGCCCACGAACTGACCGCCTACCGGGACGGGCTCAACCCGGCCG
CGCTCGCCCGTGAGATCGCCGGCATTCAGGCCGTGCTGCTGGGCCTGGCCAAGAACAAGACCGAGCAGCTCTACCTCGCG
ACCGTCCCCAAGGCACTGCCCGACGTGCGCAAAGGCGTCCGGATCAGGGCCGGCTGA

Protein sequence :
MASRAEITTRYAKAFKAADRRTKGRILDEVVSVTGWSRDNARRRLTSAAQCPPGGGRQVAQRPRKQRANKFSYEALKVLQ
RVWAASGGQCGKYLAASMDTQLDGLERHGELVDGEGRYSASVRAELLAMSPATIDRYLRTAKATDQVRGVSTTKPSPLLR
SSIKIRKAGDEVEAEPGFFEGDTVAHCGPTLRGEFARSVNLTCVHTGWVFTRSTRNNAHANILAALQAGVQEIPFAVTGL
DFDNGGEFLNRAVIKWAAEQDIYFTRSRPYKKNDQATIESKNNHLVRRYAFYYRYDTDEERHALNRLWKLVNDRLNYLTP
TIKPVGWGENKAGRRKRLYDKPQTPLSRLLAAGTLSPAQAHELTAYRDGLNPAALAREIAGIQAVLLGLAKNKTEQLYLA
TVPKALPDVRKGVRIRAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0909 YP_005160001.1 integrase catalytic subunit Not tested Not named Protein 7e-106 61
CDBH8_0921 YP_005160013.1 integrase catalytic subunit Not tested Not named Protein 3e-113 60