Gene Information

Name : Namu_0877 (Namu_0877)
Accession : YP_003200277.1
Strain : Nakamurella multipartita DSM 44233
Genome accession: NC_013235
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 969403 - 970158 bp
Length : 756 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rpc:RPC_1032 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGGGCAAGCTGGACCACAAGATCGCCATCGTCACCGGGGCGGGGCGCGGCATCGGCCGCGGCATCGCCGAGAAGCTCGC
GGCCGAAGGCGCCGTCGTGGTCGTCACCGACGTCGACGAGCAGTCCGCCGTGCACACGGCCAAGGAGTTGGGCGGTGGTT
CGGACCGGCACGTCGGGCTGCGAGTGGACGTCACCGATCGCGCCTGCGTCACCGCCATGGTCACCGCCGTCACCGAGCGG
TTCGGCCGGATCGACGTGCTGGTCAACAACGCGGGCTGGGACAAGGTCGGGCCGTTCGTCGACAGCGACGAGGCCGACTG
GGACCGGGTCATCAAGATCAACCTGTACGGCGTGCTGAACACCACCAAGGCCGTGCTGCCGATCATGGTCGGGCAGGGCC
ACGGTCATGTGGTCAACCTGGGTTCGGATGCCGGCCGGGTCGGTTCGTCCGGCGAGGCCGTGTACTCGGCCGCCAAGGGT
GGCGTCATCGCCTTCACCAAGGCCGTGGCCCGCGAGATGGCCCGCCACCAGGTCACGGTCAACTGCGTGTGCCCCGGCCC
GACCGACACCCCGCTGTTCGCCTCGATCGGCGGCGACAACCCCAAGCTGCGGGACGCACTGACCAAGGCCATCCCGCTGC
GCCGGCTGGCCGACCCGAGCGACCTGGCCAACGCCGTCGCGTTCTTCGCCTCCGAGGAGGCCTCCTACATCACCGGTCAG
ACCGTCAGCGTCAGCGGCGGCCTCACGATGAGCTGA

Protein sequence : 
MGKLDHKIAIVTGAGRGIGRGIAEKLAAEGAVVVVTDVDEQSAVHTAKELGGGSDRHVGLRVDVTDRACVTAMVTAVTER
FGRIDVLVNNAGWDKVGPFVDSDEADWDRVIKINLYGVLNTTKAVLPIMVGQGHGHVVNLGSDAGRVGSSGEAVYSAAKG
GVIAFTKAVAREMARHQVTVNCVCPGPTDTPLFASIGGDNPKLRDALTKAIPLRRLADPSDLANAVAFFASEEASYITGQ
TVSVSGGLTMS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 4e-28 41
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-28 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-28 41
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 5e-29 41