Gene Information

Name : Namu_0799 (Namu_0799)
Accession : YP_003200200.1
Strain : Nakamurella multipartita DSM 44233
Genome accession: NC_013235
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 879258 - 880058 bp
Length : 801 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gme:Gmet_2407 ABC transporter-related protein

DNA sequence : 
ATGACTCACGCCGCATCGGATTCCGGCGGCCTGGCCGTCGCGGACGGGCCGGCGCTCGTCCCGGTCGCGCGGGCGGTCGA
CCTGCACAAGGTGTACGGATCCGGCGACACCCAGGTGGCCGCCCTGGACGGGGTGTCCGTCGAGTTCTGGCCGGGCCAGT
TCACCGCGATCATGGGCCCGTCCGGGTCGGGCAAATCGACGCTGATGCACTGCCTGGCCGCGCTGGACAGTGCCTCGTCC
GGCTCGGTGTTCGTCGGTGACGCCGAGCTGACCCGGCTGGGGGACAAGGAGCTGACCCGGATCCGACGGGACCGGATCGG
CTTCGTGTTCCAGGCCTTCAACCTGGTGCCGACGCTCACCGCGCTGGAGAACATCACACTGCCGATCGACATCGCGGGGC
GCAAGCCCAACCAGGCCTGGCTGGACACCGTGATCGACACCGTCGGTCTGCGGAACCGGTTGGACCACAAGCCCAGTCAG
CTTTCTGGCGGGCAGCAGCAGCGGGTCGCATGCGCTCGCGCGCTGGCCGGCCGGCCGGACATCGTGTTCGCCGACGAACC
GACCGGCAATCTCGACTCCGTCGCCGGCGCCGAGGTTCTGGGCTTCCTGCGGCGCTCGGTCAGCGAGTTCGGGCAGACCG
TCGTGATGGTCACCCACGATCCCAACGCCGCCGGATACGCCGACCGGGTGCTGTTCCTGGCCGACGGCCGGATCGTCGAC
GAGATGGCGCAGCCGACCGCCGACCGGGTGCTGGACCGGATGAAGCACTTCGACGCGCCCGCCGCGCGGCCGAAGGGCTG
A

Protein sequence : 
MTHAASDSGGLAVADGPALVPVARAVDLHKVYGSGDTQVAALDGVSVEFWPGQFTAIMGPSGSGKSTLMHCLAALDSASS
GSVFVGDAELTRLGDKELTRIRRDRIGFVFQAFNLVPTLTALENITLPIDIAGRKPNQAWLDTVIDTVGLRNRLDHKPSQ
LSGGQQQRVACARALAGRPDIVFADEPTGNLDSVAGAEVLGFLRRSVSEFGQTVVMVTHDPNAAGYADRVLFLADGRIVD
EMAQPTADRVLDRMKHFDAPAARPKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-39 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-41 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-41 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-41 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Namu_0799 YP_003200200.1 ABC transporter NC_008702.1.4606598. Protein 6e-37 46
Namu_0799 YP_003200200.1 ABC transporter CP001581.1.gene798.p Protein 1e-42 46
Namu_0799 YP_003200200.1 ABC transporter CP001581.1.gene598.p Protein 1e-50 45
Namu_0799 YP_003200200.1 ABC transporter NC_012469.1.7686878. Protein 3e-43 44
Namu_0799 YP_003200200.1 ABC transporter NC_012469.1.7685735. Protein 2e-30 41